| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1658 |
|---|
| Symbol | |
|---|
| ID | 8725393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1990631 |
|---|
| End bp | 1993750 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386504 |
|---|
| Protein GI | 284036574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.450453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTC TTCAACAAAC GGCCCAACGC ATTTTTGACA CCCATGGTCC CAGCTTAAAC
GATGTTTGGG TAATCTTGCC CACCCGCCGG GCTGTGTCTA CCTTCCTGGA TGAGCTGGCC
GCCCTTTCTG ACAGGCCCTT TCTGGCCCCC CACGCACTTG CGGTCGATGA TTTTATCACC
CAGGCAGCGG GCGTTCAACT GATTGATTCG GTTAGTTTAC TTTTCGAGTT ATACGACGTT
TTTAAAGAAA TTGACCCGCT GGTCGAGTTT GAGCAGTTTA TCGGCTGGGC ATCCATACTG
CTCTCCGATT TCGACCGTAT TGATCAATAC CTCGTCAATC CCCACGAGTT ATTCAGCTAC
CTGACAGCCG CCAAAGCACT CGAACGCTGG CAGGTCGACA TGCCTTCGTC CGCCAAACCG
ATTGTCGAGA CGCCCGGCAC GACCCGATAC TTCAAACTGT TCGAGAATAT ACATACAGCC
TACCACGCCC TTCACCAGCG CCTGAACGAG CAGCGACTGG CCTATCGGGG AATGGCCTAC
CGGCTACTGG CGCAGCAGGT TGAACCCTTG ATTCGGGATA ATCTGGCCTA TGAGCGGGTG
TATTTTGTGG GATTCAATGC CCTGAGTAAA GCAGAAGAGC ACATTATCCG GGTGCTGGTC
GATGCCAAAA AAGCTGAACT GATCTGGGAT GCCGACCTGT ATTACATGAA TGACCGGCGG
CAGGAAGCCG GCGAATTTCT GCGACGATAT AAGGACAATG GCTGGCTTTT TTCGAGACAA
AACCATGCCG ATCTGGCGCA ACTGTCTAAT AACCTGCTAG GTTCTGAAAA AAATATCCGC
GTCGTTGGCG TACCCAATGC CAGCATGCAA ACCAAGGTAG CGGGTAAGAT TTACAGCGAA
TGGCAACGGG CCGATAGTGC AGTGCCACGC GATGCTGCAA CGCCCTCGCC AAAGACCGCT
ATCGTACTGG CTGACGAAAC ACTTCTGGTG CCCGTGTTAT ACGCGCTGGA TGAAAACGTG
ACCGACCTGA ACGTTACTAT GGGTTTGTCG TTGCGTTCGT CGCTGTTGTT TACCCTGGTC
GACACGTTGT TTGAGATGCA GCGGACGGTC CATGAGTTCC GTACCAAAGA CGGGCGCGAC
CTCAAGATCC CCAAGTTTCA CCATCGCCAC GTCGTAAAAC TCCTTAACCA CCCCTTCCTG
AAGCAGTACG AGCGTATACG GGGGCTGATG TGGCCGGGCG ATGTACTGTC GACAGGGGAA
ATTTTACCGC CCGAACCGCT CTTCCAGTGG ATCGCCAAGG AGATTGTGAA AAATCAGCGG
GTATACCTGA CCGAGCGGGA CATGCTGGAA CTGGGGCAGG ATGACCCACT CGTGCGGGTG
CTGTTCAGGC GTTGGCCCAA TGAAGAGCCC ATGAAGGCCA TTCGTACGTT TTATGACCTG
ATCGAGTTAC TGCGCGACGT GTATCGTACC AGTCAGGATG CCATCGAGAT CGAGTACCTA
TACCTTTTCT TTACCCTGCT CAAACAGCTG GAAGCAACGC TGGACAGGCA GGGCGAAGGA
GCACAAGGGG CCGGGCGCGG AGTACCGGTG CCCAAGGCGC GAAATAGAGG GCAGGGGGGA
ACCGCCATCC TGGATACGGG CGCCCCGGTT CCCATGCTAC ACGTCCACGA ACCGTCGGCC
GCCGTTACCG TGCGCAGCCT GAAACAGTTT TTGTACGAAC TGATTCGGCA AACGAGTATT
CCCTTTACCA GCGAAGGGAA GAGCCAGTTG CAGATCATGG GTATGCTCGA AACACGGGCT
CTGGATTTTG ACCGGGTTAT TATTCTGTCA GTGAACGAAG GGATTCTGCC GCAGTCCAGA
AAGTTAAACT CGCTTATTCC GTTCGATATA GCCGCCGATG AAAACATAAA GCTGCCTACT
TATAGCGAAC AGGAGGCCGT GATGGCGTAC CACTTTTACC GGTTGCTGCA ACGGGCCAGC
GAAGTGGTGC TCTTGTACAC AACCTCGACA GATGCGTACG GGAATAGCAA AGGTGAGCCA
AGCCGCTTTA TCCGCCAGCT GGAACACGAG CTGGTGCCCC GCTCTAACGG ACTCGTTCGG
ATAAGCTACC CAACGGTTCG TTTCGGTCGG ACAAGCGAGA AAAAGGAAAC CAGTCTGACC
GAGCTGAGTG TGCCCAAAAC GGAATCGGTG CGGGACGGTC TGATCAATCT GCTCATAACG
AAAGGGTTGT ATCCATCTTA CCTGAATCAG TTCGTGAGCT GTTCCATGCG GTTTTACTTC
AGCCGGATTG TAAATATTAG TGAGGAAGAA GACATCGAAG AGAAAATGGG AGCGGCTGAG
TTCGGAAGCT GGCTGCACAA AGTGATGGAG CGGCTAGACC TTGAGTACCG CCTGAAGGCG
CTGCCCATCG ACGAGTCGAT CATTAAAATG CTGCTCGAAG AAGAGTTTGC CAGTACCAAC
AAAGGCCGGG TTATCGAGTC GGGCATGAAC CTGCTGCTCT ACGACCTGGC ACAGAAACTC
ATGCTCGACT TTCAGCGTCA GCAGAATGCG CTTCCTGGTT TGACCGTTAT CGGAACGGAG
CAAACCCTCG AAACGTATTT GACTGTATCC ATTGAAGGGC GTGGGGCCGT TCGGGTGCGG
ATAGCGGGTA AAGTAGACCG TATCGAACGT CTGGGTGATC AAATTCGAAT TGTCGATTAT
AAAACGGGCA AAGTCGACCT GTCCGAAAAA ACGCCCAAAG ACCTGAGTGA TCGATTACTG
AACGATGGGG GCGACGATGC GGGTAAGATG CGGCAGTTGT GGCTGTACCG GTATCTGGCC
CTTAAAAACA TTAGCGAGTA TGGTGGTTTG CCCCGCGACC GGGCTAAACG GGATATTTTT
AATGCGGAGG GTATGCCTGT CGAAGCTGGC TTTTATTCGT TCCGGGATGT GAATGGGGGC
TTTAAAACAA ACCCTGTTCG CTTCGGAGAC AATGATAGCC CTGGTCAGTA CATCGAAGAT
TCGGAGGATT TACTTCGCCA ATTGATACAA CAACTGCTCG ACCCTGAACA ACCGTTCAGG
AAAACGGACC AGATTGAGAC CTGCCAGTTT TGTGATTATA AGGGTATTTG CGGGCGATAA
|
|---|
| Protein sequence | MTFLQQTAQR IFDTHGPSLN DVWVILPTRR AVSTFLDELA ALSDRPFLAP HALAVDDFIT
QAAGVQLIDS VSLLFELYDV FKEIDPLVEF EQFIGWASIL LSDFDRIDQY LVNPHELFSY
LTAAKALERW QVDMPSSAKP IVETPGTTRY FKLFENIHTA YHALHQRLNE QRLAYRGMAY
RLLAQQVEPL IRDNLAYERV YFVGFNALSK AEEHIIRVLV DAKKAELIWD ADLYYMNDRR
QEAGEFLRRY KDNGWLFSRQ NHADLAQLSN NLLGSEKNIR VVGVPNASMQ TKVAGKIYSE
WQRADSAVPR DAATPSPKTA IVLADETLLV PVLYALDENV TDLNVTMGLS LRSSLLFTLV
DTLFEMQRTV HEFRTKDGRD LKIPKFHHRH VVKLLNHPFL KQYERIRGLM WPGDVLSTGE
ILPPEPLFQW IAKEIVKNQR VYLTERDMLE LGQDDPLVRV LFRRWPNEEP MKAIRTFYDL
IELLRDVYRT SQDAIEIEYL YLFFTLLKQL EATLDRQGEG AQGAGRGVPV PKARNRGQGG
TAILDTGAPV PMLHVHEPSA AVTVRSLKQF LYELIRQTSI PFTSEGKSQL QIMGMLETRA
LDFDRVIILS VNEGILPQSR KLNSLIPFDI AADENIKLPT YSEQEAVMAY HFYRLLQRAS
EVVLLYTTST DAYGNSKGEP SRFIRQLEHE LVPRSNGLVR ISYPTVRFGR TSEKKETSLT
ELSVPKTESV RDGLINLLIT KGLYPSYLNQ FVSCSMRFYF SRIVNISEEE DIEEKMGAAE
FGSWLHKVME RLDLEYRLKA LPIDESIIKM LLEEEFASTN KGRVIESGMN LLLYDLAQKL
MLDFQRQQNA LPGLTVIGTE QTLETYLTVS IEGRGAVRVR IAGKVDRIER LGDQIRIVDY
KTGKVDLSEK TPKDLSDRLL NDGGDDAGKM RQLWLYRYLA LKNISEYGGL PRDRAKRDIF
NAEGMPVEAG FYSFRDVNGG FKTNPVRFGD NDSPGQYIED SEDLLRQLIQ QLLDPEQPFR
KTDQIETCQF CDYKGICGR
|
|---|
| |