Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1641 |
Symbol | |
ID | 8725376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1973889 |
End bp | 1974749 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Peptidase M23 |
Protein accession | YP_003386487 |
Protein GI | 284036557 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0361826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCT TTAGCTTAAC AGTTTTTAGT GGGGTTTTAC TGACATTATC GGCTATGGGC CAAACGAAAA ACTCCTCGCC TGCCGAATCC GCAAAATCCG TGACAGTCGG TCAGGGCGAA GTAGCTCGCT GGGCCGGAAA TTGCCTTCGG TGCAGTTTCG AAAAACGGGC CTGGGATGCA GTCAATGGCA CCTGCTATTA TCCGGTAGAT ATGGATATGG AGCCGGGGAA GTATACAATT TCCCGCCGGA CCACGGGTGG AAAGCTGGAG TCGGCAACGC TTACGGTAAC CGAAAACTCC TGTCAGCAGG AAGACATTAA GAACTTCCCC AAAAAGGAAT TCGTAAATGT GTCGGCTAAG AATCAGGCCA GAGCGGCTAA GGAAGCTGCC ATTGTCAATC CGCTGATCAG TTACAAAGCA GCGGTTCGTC CGGCCGTATT CGATTTGCCC GTGGGCAAGC CCGCCAATCC GCTGCCCAAA GGCGAGGGTA ACTTTGGCGC CTGCCGAACG TTTGACGGAC AACCCCGCGA TCGGCATACC GGACAGGACT ACCCAGTTGC GGTAGGTAAG CCAGTGTTAA GTATCGGTAA TGGCCGGGTG GTACTGGCCG CCAATCAGTT TTTTAGCGGT AATGCCGTTT ACATTGATCA CGGTAATGGA TTAATCAGTG AGTATTTTCA CTTGAAAAGT TATTCGGTCA AGCCAAACCA GACCGTAACC AAAGGCCAAA CTATTGGGTT GACTGGCGAA ACAGGTCGGG TAACGGGGCC GCATCTGCAC CTGGGCGTTC GCTGGCACGG GGCCTGTATC AACCCTGGCT TCCTGCTGAT TGATCCGTCA GATATGCCGG AAGTACAATA G
|
Protein sequence | MNIFSLTVFS GVLLTLSAMG QTKNSSPAES AKSVTVGQGE VARWAGNCLR CSFEKRAWDA VNGTCYYPVD MDMEPGKYTI SRRTTGGKLE SATLTVTENS CQQEDIKNFP KKEFVNVSAK NQARAAKEAA IVNPLISYKA AVRPAVFDLP VGKPANPLPK GEGNFGACRT FDGQPRDRHT GQDYPVAVGK PVLSIGNGRV VLAANQFFSG NAVYIDHGNG LISEYFHLKS YSVKPNQTVT KGQTIGLTGE TGRVTGPHLH LGVRWHGACI NPGFLLIDPS DMPEVQ
|
| |