Gene Slin_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1641 
Symbol 
ID8725376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1973889 
End bp1974749 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003386487 
Protein GI284036557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0361826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCT TTAGCTTAAC AGTTTTTAGT GGGGTTTTAC TGACATTATC GGCTATGGGC 
CAAACGAAAA ACTCCTCGCC TGCCGAATCC GCAAAATCCG TGACAGTCGG TCAGGGCGAA
GTAGCTCGCT GGGCCGGAAA TTGCCTTCGG TGCAGTTTCG AAAAACGGGC CTGGGATGCA
GTCAATGGCA CCTGCTATTA TCCGGTAGAT ATGGATATGG AGCCGGGGAA GTATACAATT
TCCCGCCGGA CCACGGGTGG AAAGCTGGAG TCGGCAACGC TTACGGTAAC CGAAAACTCC
TGTCAGCAGG AAGACATTAA GAACTTCCCC AAAAAGGAAT TCGTAAATGT GTCGGCTAAG
AATCAGGCCA GAGCGGCTAA GGAAGCTGCC ATTGTCAATC CGCTGATCAG TTACAAAGCA
GCGGTTCGTC CGGCCGTATT CGATTTGCCC GTGGGCAAGC CCGCCAATCC GCTGCCCAAA
GGCGAGGGTA ACTTTGGCGC CTGCCGAACG TTTGACGGAC AACCCCGCGA TCGGCATACC
GGACAGGACT ACCCAGTTGC GGTAGGTAAG CCAGTGTTAA GTATCGGTAA TGGCCGGGTG
GTACTGGCCG CCAATCAGTT TTTTAGCGGT AATGCCGTTT ACATTGATCA CGGTAATGGA
TTAATCAGTG AGTATTTTCA CTTGAAAAGT TATTCGGTCA AGCCAAACCA GACCGTAACC
AAAGGCCAAA CTATTGGGTT GACTGGCGAA ACAGGTCGGG TAACGGGGCC GCATCTGCAC
CTGGGCGTTC GCTGGCACGG GGCCTGTATC AACCCTGGCT TCCTGCTGAT TGATCCGTCA
GATATGCCGG AAGTACAATA G
 
Protein sequence
MNIFSLTVFS GVLLTLSAMG QTKNSSPAES AKSVTVGQGE VARWAGNCLR CSFEKRAWDA 
VNGTCYYPVD MDMEPGKYTI SRRTTGGKLE SATLTVTENS CQQEDIKNFP KKEFVNVSAK
NQARAAKEAA IVNPLISYKA AVRPAVFDLP VGKPANPLPK GEGNFGACRT FDGQPRDRHT
GQDYPVAVGK PVLSIGNGRV VLAANQFFSG NAVYIDHGNG LISEYFHLKS YSVKPNQTVT
KGQTIGLTGE TGRVTGPHLH LGVRWHGACI NPGFLLIDPS DMPEVQ