| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1636 |
|---|
| Symbol | |
|---|
| ID | 8725371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1968582 |
|---|
| End bp | 1969793 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_003386482 |
|---|
| Protein GI | 284036552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATACGG TGACGAACCG GCAACTATTT TTTCAGCATA TAGCCCAGAC CTCCGATTTC
CCCTTAGGGT TGGAAATTGA TCGGGCAGAG GGCGTATATC TTTTTGGAAA GCAGACGGAT
GAGATCTACA TGGACCTTAT TTCGGGTATC GGCGTCAGTA ATGTCGGGCA TCGGCATCCG
CACGTGCTGC GAGCCATTCA GAGCCAGTTA GATAAATACC TTCACCTGAT GGTGTATGGC
GAGTACGTTC AGACACCTCA GACAGAACTG GCTCAGGCAC TGGCCCAAAC GCTGCCGACT
AGCCTGAATA CCGTTTACTT TACCAACTCA GGCACCGAAG CCGTTGAAGG AGCCATGAAA
TTGGCGAAAC GATACACTGG TCGGACGGAG ATTATCAGTT GCTTCAACGC CTACCACGGC
TCCACACAAG GTGCCCTGTC GCTCTCGGGC GACGAAAACT TTAAACGTAA TTACCGCCCC
CTCCTGCCCG ACATTCGGCA CATCCGGCAT GGTAACTGGC TCGATATTGA TCAGATCAGC
GACCGTACTG CGGCTGTTGT CATGGAAGTC GTTTGCGGTG AAGCGGGCGT TCGGGTTCCC
GACGCGGCTT ATATGCAGGC CGTTCGGCAA CGCTGTACCG ATACGGGCAC GCTGTTGATT
TTCGATGAAA TTCAGACGGG TTTCGGCCGT ACGGGCACCT TCTGGGCGTT TGAAGACGTT
GGCCCTGTTA TTCCCGACAT TTTGCTGTGT GCCAAAGGGA TGGGGGGCGG AATGCCCATC
GGTGCCTTTA TCAGCTCGGC GGAAATTATG AGCGTGTTCC GGAACAATCC CATTCTGGGG
CACATCACCA CCTTTGGCGG GCATCCGGTT TCGTGTGCGG CCTCCCTGGC CACGTTGCAG
ATAATTCAGA CCGAAAAACT GCACGAACAG GCCAAAGCCA AAGGCCAATT GTTCCGGCAG
TTGCTGACCC ACCCGGCTAT CCGGGAGGTA CGTGGAAAAG GATTGATGCT GGCCGTTGAA
TTTGACTCGT TCGATGTACT GAAACCCGTT ATTGACCGAG CCATTCTGGG CGGTGTCATC
ACCGACTGGT TTCTTTTCTG CAACAACTCG ATGCGTATCG CTCCCCCGTT GATAATCACG
GAGGAGGAAA TCAGGAGAGC CTGCGCGGTC ATTCTCGAAG CGATTGAATA CGTAACGGTA
CCTGTAAATT AA
|
|---|
| Protein sequence | MYTVTNRQLF FQHIAQTSDF PLGLEIDRAE GVYLFGKQTD EIYMDLISGI GVSNVGHRHP
HVLRAIQSQL DKYLHLMVYG EYVQTPQTEL AQALAQTLPT SLNTVYFTNS GTEAVEGAMK
LAKRYTGRTE IISCFNAYHG STQGALSLSG DENFKRNYRP LLPDIRHIRH GNWLDIDQIS
DRTAAVVMEV VCGEAGVRVP DAAYMQAVRQ RCTDTGTLLI FDEIQTGFGR TGTFWAFEDV
GPVIPDILLC AKGMGGGMPI GAFISSAEIM SVFRNNPILG HITTFGGHPV SCAASLATLQ
IIQTEKLHEQ AKAKGQLFRQ LLTHPAIREV RGKGLMLAVE FDSFDVLKPV IDRAILGGVI
TDWFLFCNNS MRIAPPLIIT EEEIRRACAV ILEAIEYVTV PVN
|
|---|
| |