Gene Slin_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1629 
Symbol 
ID8725364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1961553 
End bp1962617 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386475 
Protein GI284036545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.237117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTTTTT CCATTTACAT CGTCTTTTTT CTGATCGCGT GTCAACCGGC TGGATTCGCG 
CAGTCGCTCG GTGGGCAGCG TATCTTTTCG TTTCTTGATC TGCCCACGCA TGCCCGCGTA
GCGGCTTTGG GTGGGCAGGT CGCTACCGCT GTTAGCCCTG ACGGGGCTTA TCACCTCAAT
AACCCGGCCC TGGCCGATTC GGTCAAGCCA AATCTTGGCT CCATTAGCCT GATGCCTTAT
CTGGCGGCAG CCAAATACTA TACCATTCAA TATGGGTTAC CTGTTAAACA AATCAGCCCC
GACCGGCACA CGGGTTGGGC GGTTGGCCTG CAATACCTGA GCTACGGGCA GTTTGACATG
ACCGACCCTA TGGGCAACTC GCTCGGCACT TTTTCGGCCA ATGACTACGC GCTAAGCCTG
ACCCACTCCC GAACAGAAGG CAATTTCACC CTCGGAGCAA CCATCAAAGC CGTCGGCTCA
TCCATCGAAA TGTATTCGGC ATTTGGCGTT CTGGCGGATC TTGGCGGAGT GTGGCGACAC
CCGAAACAGG ATCTAACGTT TGGGCTGGTG GCAAAAAATG TTGGGTATCT GATCAAAAAC
TACGGTCCGA CGGATGCCGA CTTACCCTTC GATTTACAGG CAGGCGTTAC GCTCAAACCC
CGCCACGCGC CTGTTCGGCT GACGGTTACG GCCCACCACC TCCAACGGTT CGACATCAGT
TACAACGACC CGAATCTGAA CGTCCGCTAC GATTTGAGTG GGAACCCCAT CTCAGAGACG
ACCAGCGTTA CTGAAAAAAT AGCCCGGCAC TTAAGCGTGG GAGCCGAACT GCTGCTCAGC
CGTAACGTAC ATTTGCTGGT TGGCTACAAT CACCAGAAAC GGGCCGAAGG AAAGGTAACG
ACAACGGGCA TTGGTGGCTC GGCGTTTACC GGAACAGGTA TTTCGTTCGG AGCCTCGGTG
CAGGCACGAG CCTTTCAATT GACCTACGCC CGGTTCACAT CTATTCCAAC CGCCGGTACG
AGTCAGTTAT CCCTTCGAAT TGATCTGGAA CGACTTTTAA AGTGA
 
Protein sequence
MRFSIYIVFF LIACQPAGFA QSLGGQRIFS FLDLPTHARV AALGGQVATA VSPDGAYHLN 
NPALADSVKP NLGSISLMPY LAAAKYYTIQ YGLPVKQISP DRHTGWAVGL QYLSYGQFDM
TDPMGNSLGT FSANDYALSL THSRTEGNFT LGATIKAVGS SIEMYSAFGV LADLGGVWRH
PKQDLTFGLV AKNVGYLIKN YGPTDADLPF DLQAGVTLKP RHAPVRLTVT AHHLQRFDIS
YNDPNLNVRY DLSGNPISET TSVTEKIARH LSVGAELLLS RNVHLLVGYN HQKRAEGKVT
TTGIGGSAFT GTGISFGASV QARAFQLTYA RFTSIPTAGT SQLSLRIDLE RLLK