Gene Slin_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1627 
Symbol 
ID8725362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1959412 
End bp1959813 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content39% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003386473 
Protein GI284036543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0696983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTG GAACGATATT GCGTAAAAAC CGGGAAAAGA AGCGACTCTC TCAAAAAGAG 
GTGGCAGAAC ACATTGGCAT AGCACAGGCT ACTTACCACA ATTGGGAAAC AGAACAGTCG
AGTTTTCGAG TAGAGTATTT GCCCAAATTA GCCGAGGTAT TTGACGTGGC TATGGGAGAT
TTAATGCCTG AAGGCACTAC GTTGAAACTG ATGAACAATC AGCATCAGAA GAACCACGAT
AGATCAGTAG TAGGTTTTGA TGTTACTATA AACGAGTCGC GTGAGCTATA TACAGAGTTG
GTGAATAGTA AGGATGAAAT AATCCGATTG TTAAAGGAAG AAAATACATT GTTAAAAGTT
CGTAATGCAC AATTAGATGA AAACCAGAAA AGAGATGCTT AA
 
Protein sequence
MTFGTILRKN REKKRLSQKE VAEHIGIAQA TYHNWETEQS SFRVEYLPKL AEVFDVAMGD 
LMPEGTTLKL MNNQHQKNHD RSVVGFDVTI NESRELYTEL VNSKDEIIRL LKEENTLLKV
RNAQLDENQK RDA