Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1623 |
Symbol | |
ID | 8725358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1953280 |
End bp | 1955487 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003386469 |
Protein GI | 284036539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.068726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.025744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAAAAA AGTATCCCTT TTACCGTCAG TACGACCTGA TGGATTGTGG GCCTACGTGC CTACGGATGA TTAGTAAGTT TCATGGCAAG TCGTTAGATG CCGCTTATCT TCGGGAAATA GCCAATTTGG CCCGCGACGG TACCACTATG GGTGGGCTTG CCGATGCCGC CGAGCGAATT GGGTTTAGTA CACTGGCGTT AAATGCTCAA TACGATACCC TGGCCGAGCA AATTCCGTTG CCCTGTATTG CGCACTGGCG GCAACGGCAT TTTGTGGTGG TGTATGAAGC AACACCAACA AAAGTAGTTG TCGCCGACCC CGGCCACGGC TTGCTGACGC ATACTAAACA GGAGTTTTTG AAGGGATGGA TTCCTGAAAA AACTATTTCA GACGACTCAG AAGGGGTCTT GCTACTGTTT GAGCCAACAC TCCGGTTTTA TGAGCAAGAG AATACTCCTA AAGCGAACAA GAAATCATTT AGCGGATTTT TGTTACGCTA TTTTCGACCG TATAACCGAT ATGGCCTGCA ACTCTTTCTT AGCCTATTAA CAATCAGCTT ACTGCAATTA GCCTTACCTT TTTTAACCCA GCAAATTGTC GATACAGGGA TTAATACCCG CAATCTCAAT TTCATTTACC TGGTACTGAT TGCTCAGTTG GTCTTATTCA TTTCCCAGAC CGGAGTCAAC GTACTGCGCA GTTGGATTTT GCTGCATGTG ACAAGCCGGG TAAACCTGCG TATGCTCTCC GACTTCATGA TGAAGCTAAT GCGGCTACCT ATAGCCTTTT TCGATTCGAA AGGAACTGGT GATATTTTAC AACGGATTCA GGATCACAAT CGCATCCAGG CTTTTTTATC AGCCACTACG CTGGACGTAC TTTTTTCGGC TGTCTCCTTC CTAATTTTCG GGTCGATTCT TTTCTATTTC AATGCCCAGC TATTTTTCAT TTTCCTCCTC GGATCGGGCC TGTATATGGT CTGGGTCTTG TTGTTTTTAA AACAACGTGC CGAAATCGAT TATCGGTATT TCGACCAGGC TGCCGGTAAC CAGAGCAGTG CGATACAGCT CATCAACGGA ATGCAGGAAA TAAAACTCAA TGGGTCTGAA AAACGACGAC GCTGGGAGTG GGAAGCCATT CAGGCCCGTT TATTTAAATT AAACATCCGT AGTATGGCTC TTTCTCAAAC GCAAAATGAG GGTGGGCGTT TTCTCAACGA AGTCAAAAAT ATTCTAATCA GTTTTGTTGC CGCAAAATCA GTAATTGATG GCCATATTAC TCTTGGCTCG ATGCTATCCG TTCAATACAT TGTTGGTCAG ATGAATGTGC CCATCAACAA TTTTATTGCC TTCATTAGAA CGTATCAGGA TGCAAAATTA AGTTTGGGCA GATTGACCGA AATTCATGAT AAAGACGACG AAGAGTCTAC GGTTAACACA ATGATTTATG AACTACCAAC CGAGCGAACT ATTTCCTTCG ATAACGTAAG CTACAGATAC GGTAGCAGTA GTTCTGAATT AGTATTGAAA AATATCAGTT TTACGGTTCC CGAAGGAAAA GTTACGGCCA TTGTAGGGGC AAGTGGCAGT GGCAAAACAA CTTTATTAAA GCTACTGTTA AAATTTTACG AACCGGTTCA AGGCCAAATT CATATTGGCA ATAGTAATTT AAAAAACATC AGCTATGATT TTTGGCGTAG CCAGTGTGGA GTCGTTATGC AGGAAGGGTA TATTTTTTCG GATTCAATTT CGCGAAATGT GAGTGAGTCA GACTCCAATG GGTTAATTGG CCGAAAAAAG CTACGAGAAG CCGTAAGCAT TGCAAACATT GAAGAGTTTA TAGAAAGTCT GCCGAATGGG TTTAACACAC GAATTGGCTC CAGCGGAACA GGGTTAAGCG GTGGGCAGAA GCAAAGGATA TTGATCGCCC GAGCGGTTTA CAAAGATCCC GCATTCATTC TTTTTGATGA AGCAACCAGT GCTTTGGACG CCAATAATGA ATCGGTTATC ATGAAGAACC TGGATAGCTT TTTCAAAAAT AGAACAGTGA TTATTGTAGC TCACCGGCTG AGTACGGTAA AAGCAGCTGA TCAAATTATT GTACTTGACA AAGGAGAGAT TGTTGAACGC GGGACTCACC TCGAATTAGT TAACCAAAAA GGGAACTACT ACAGCTTAGT TAAAAATCAA TTAGAGCTTG GCAACTAA
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Protein sequence | MAKKYPFYRQ YDLMDCGPTC LRMISKFHGK SLDAAYLREI ANLARDGTTM GGLADAAERI GFSTLALNAQ YDTLAEQIPL PCIAHWRQRH FVVVYEATPT KVVVADPGHG LLTHTKQEFL KGWIPEKTIS DDSEGVLLLF EPTLRFYEQE NTPKANKKSF SGFLLRYFRP YNRYGLQLFL SLLTISLLQL ALPFLTQQIV DTGINTRNLN FIYLVLIAQL VLFISQTGVN VLRSWILLHV TSRVNLRMLS DFMMKLMRLP IAFFDSKGTG DILQRIQDHN RIQAFLSATT LDVLFSAVSF LIFGSILFYF NAQLFFIFLL GSGLYMVWVL LFLKQRAEID YRYFDQAAGN QSSAIQLING MQEIKLNGSE KRRRWEWEAI QARLFKLNIR SMALSQTQNE GGRFLNEVKN ILISFVAAKS VIDGHITLGS MLSVQYIVGQ MNVPINNFIA FIRTYQDAKL SLGRLTEIHD KDDEESTVNT MIYELPTERT ISFDNVSYRY GSSSSELVLK NISFTVPEGK VTAIVGASGS GKTTLLKLLL KFYEPVQGQI HIGNSNLKNI SYDFWRSQCG VVMQEGYIFS DSISRNVSES DSNGLIGRKK LREAVSIANI EEFIESLPNG FNTRIGSSGT GLSGGQKQRI LIARAVYKDP AFILFDEATS ALDANNESVI MKNLDSFFKN RTVIIVAHRL STVKAADQII VLDKGEIVER GTHLELVNQK GNYYSLVKNQ LELGN
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