Gene Slin_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1621 
Symbol 
ID8725356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1951574 
End bp1951984 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386468 
Protein GI284036538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000993233 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.050685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA TTGAACCCCG CATCCGTCCG CTGGTCGATG CCCTGAATAA AACCGGCCTG 
GTTCGCACAT TCTCAAGCTG CGAAGGACAT TTTTCGCCTG AAGAACAGAC GCTAGTCGAC
CGAAATCATG CCGAAGTCCG GTTCGTGCCT GCCGAGGGTG TTGGTGTTCC GGAGATTGAC
ATGTTCATCG GGCGCATTTT AGCCCAATTC AAGTCAAGGC ATGGGTTGCT ACCGGTAAAG
GTTACGGCTT ACAAACTCTT TACGCCAATC GACGAAGAAA ATGTTGAGGA AACGTACGTG
TTTGACCTGC GGCCCTTCAA CCGGTTCGAC CCTCCCGACC GGAAACGGGC CGATGTGGAC
CGGGCTATCA CACAGGTTGT TCGATTGATG TTATCGGAAA GCTACCGCTG A
 
Protein sequence
MEDIEPRIRP LVDALNKTGL VRTFSSCEGH FSPEEQTLVD RNHAEVRFVP AEGVGVPEID 
MFIGRILAQF KSRHGLLPVK VTAYKLFTPI DEENVEETYV FDLRPFNRFD PPDRKRADVD
RAITQVVRLM LSESYR