Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1621 |
Symbol | |
ID | 8725356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1951574 |
End bp | 1951984 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386468 |
Protein GI | 284036538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000993233 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.050685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGATA TTGAACCCCG CATCCGTCCG CTGGTCGATG CCCTGAATAA AACCGGCCTG GTTCGCACAT TCTCAAGCTG CGAAGGACAT TTTTCGCCTG AAGAACAGAC GCTAGTCGAC CGAAATCATG CCGAAGTCCG GTTCGTGCCT GCCGAGGGTG TTGGTGTTCC GGAGATTGAC ATGTTCATCG GGCGCATTTT AGCCCAATTC AAGTCAAGGC ATGGGTTGCT ACCGGTAAAG GTTACGGCTT ACAAACTCTT TACGCCAATC GACGAAGAAA ATGTTGAGGA AACGTACGTG TTTGACCTGC GGCCCTTCAA CCGGTTCGAC CCTCCCGACC GGAAACGGGC CGATGTGGAC CGGGCTATCA CACAGGTTGT TCGATTGATG TTATCGGAAA GCTACCGCTG A
|
Protein sequence | MEDIEPRIRP LVDALNKTGL VRTFSSCEGH FSPEEQTLVD RNHAEVRFVP AEGVGVPEID MFIGRILAQF KSRHGLLPVK VTAYKLFTPI DEENVEETYV FDLRPFNRFD PPDRKRADVD RAITQVVRLM LSESYR
|
| |