Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1615 |
Symbol | |
ID | 8725350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1945781 |
End bp | 1946776 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003386462 |
Protein GI | 284036532 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.665959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.16082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCTT TTCTCAACCA GATTAAGCCT TGGGTGAGTG TCATATGCAT CTCCTACAAC CACGCGTCCT ACGTTCAACA GGCGCTTCAA TCGGTCGTTG ATCAGGATTA TCCAAATGTC GAGCTAATTG TTATCGACAA TGGCAGTATA GATCGGTCAG CCGAGTTCAT TACCCGGTTT ACCGAACGGC ATTCCGCTAT TCGATTTATC CAGAATCCGG TTAACGTTGG CTTAAACCGG GCATTCAATC AGGGACTGGC GTTGGCCGAA GGTCGCTATG TGATCGATCT GTCGGCCGAT GATGTATTGC TTCCGGGCCG TCTCTCGAAA CAGGTTGCCC AGTTTGAGAA GCTGGCGGGT CCTTATGCCG TTGTGTTTTC CAATGCTGCT TACATTGACC GCAGCGGTCG AGAAGTGGGC CTACATTATG TCGTAGATGC TAGTGGGCAT GCGCGCTTAC CGGTGCCATC GGGCAATGTG TTCAAGCCAA TTCTGGAGTC TTATTTTATA TGCACCCCAA CCATGATGAT GCGTCGGGAC GTTCTGAATG AACTGGGCGG CTACGATGAA TCCCTGGCCT ACGAAGACTT CGACTTCTGG GTCCGTTCGG CCCGGCTCTA TCATTATGCG TATCTGGATG AAATACTGAC CCAGAAACGC CTTACACCCG ATTCCTTTTC GGCCCGGATC GTGTATACAA ATACGACCCT GCTGCACTCC ACACTGGCCG TGTGTTATAA AGCCTTCGAG CGGTGTGTTA CCCCCGATGA ATTCCGTGCC CTGGCCGGAC GCGTCAGACG GTTTATCCGA AAAGCTTTTT ATGTCGAGCA ATTCGATCTG GCCCTTGAGT TTGGCGACCT TCTTTACCAT ATTGAACAAC CGGATTGGCA AAGCAAGCTG ATTTTAGGTC TGAGTAAACT CCATCTTCCG GTCAATAAAC TATACCGGCG TTACCTCAAG TGGAGCCCGG TACTTCATTC GGCGAAACTG GATTAA
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Protein sequence | MSPFLNQIKP WVSVICISYN HASYVQQALQ SVVDQDYPNV ELIVIDNGSI DRSAEFITRF TERHSAIRFI QNPVNVGLNR AFNQGLALAE GRYVIDLSAD DVLLPGRLSK QVAQFEKLAG PYAVVFSNAA YIDRSGREVG LHYVVDASGH ARLPVPSGNV FKPILESYFI CTPTMMMRRD VLNELGGYDE SLAYEDFDFW VRSARLYHYA YLDEILTQKR LTPDSFSARI VYTNTTLLHS TLAVCYKAFE RCVTPDEFRA LAGRVRRFIR KAFYVEQFDL ALEFGDLLYH IEQPDWQSKL ILGLSKLHLP VNKLYRRYLK WSPVLHSAKL D
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