Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1613 |
Symbol | |
ID | 8725348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1943936 |
End bp | 1944973 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | putative lipoprotein |
Protein accession | YP_003386460 |
Protein GI | 284036530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.420065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.214118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTAT CTTTAGCCGC GCTTTCAGTA TTGACGTTAT GTCAACTTAC CAGCTGCTCA ACACAATCGA AAGACGAATC GTCAAAGACT GGTAACATTG CTCTCGAAGC ATCCGCCAAG AGTCCGGCAG CGACCTCGTC AGCCGACTCC TCGGAAGCCC CCAAGGAAAA GCCCGTGGCG GCAGCCCGGC CCGCAGGAGC CGTTTCTACC GGCGATTCAA CGCTCGACTC GCTGACCTTT GCTCCCCCTG CCGGTGCGTT GCTTCCCAAA TACCGCATCT TCGCGTATTA CGGTAATCCG CACTCCAAAA AAATGGGTGT ATTGGGAAAA TACCCGAAAG ACGAAATGCT GAAACGGCTG GACGAAGAAA TCAAAAACTG GCAAAAAGCC GACCCGGCAA CACCCATTCT GCCCGCCCTC CATTTGGTTG CTACATCGGC ACAGGGTTCG CCCGGAAAAG ATGGTGGCTA TCGGATGCGA ATGTCGGATA AGACTATTAA GAAAGTACTT AAGTGGGGAA ATGACCATAA GGCCATCGTT TTTCTGGACA TTCAGCGGGG TCATGCCCCC CTCGGTCCCG AAATGGAGTA CATGACCAAA TACCTCAAAC TTCCCTTCGT TCATTTGGGT ATCGATCCGG AGTTTTCGAT GGTAACAGGA GCCAAGCCGG GTACAAAAAT TGGGTCGTAT GATGCCGCCG ACGTTAATCA GGCGGTCAAA TTTTTGAGCC GGATTGTGAA GGAAAATAAC CTGCCCCCAA AAATTCTGGT GGTTCACCGC TTCACGCAGG GCATGATCAA GAATTATAAA AATATCAAGC TCGACCCAAA TGTCCAGATT GTGATGGATA TGGATGGATG GGGACCGCCG GTACTTAAAA AGGATTCCTA TCTGGCTTAC ATTCAGAAGG AGCCCGTCCA ATACACAGGT TTCAAGCTAT TTTACGAGAA CGACTTCCGC AAGCCCGGCT CTCGTATTAT GACACCCGCC GAAGTGCTGG CGTTAACACC CAAACCCTTG TATATTCAGT ACCAGTAA
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Protein sequence | MRLSLAALSV LTLCQLTSCS TQSKDESSKT GNIALEASAK SPAATSSADS SEAPKEKPVA AARPAGAVST GDSTLDSLTF APPAGALLPK YRIFAYYGNP HSKKMGVLGK YPKDEMLKRL DEEIKNWQKA DPATPILPAL HLVATSAQGS PGKDGGYRMR MSDKTIKKVL KWGNDHKAIV FLDIQRGHAP LGPEMEYMTK YLKLPFVHLG IDPEFSMVTG AKPGTKIGSY DAADVNQAVK FLSRIVKENN LPPKILVVHR FTQGMIKNYK NIKLDPNVQI VMDMDGWGPP VLKKDSYLAY IQKEPVQYTG FKLFYENDFR KPGSRIMTPA EVLALTPKPL YIQYQ
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