Gene Slin_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1609 
Symbol 
ID8725343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1938484 
End bp1938957 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386456 
Protein GI284036526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.611903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.569054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTG CCCAATTGAA TATCTCCAGA ATGCTGGCAC CGGACATTAA TCATCCGATT 
ATGGCTGATT TTGTTGCCCA GCTAGATACA ATTAACAAGT TAGCAGAACA AAGTGACGGG
TTTATCTGGC GGCTCACCGG CGAGGGAAAC GATGCCACTA GCTTACGACC CTTCGACGAC
GAGCGGATTA TTGTAAATAT GTCTGTTTGG GCTTCGCTGG AACAATTACA GACCTTTGTT
TTCAAGAGCG CGCATACACC TGTCATGAAG GACCGGCGAA AGTGGTTTGA GAAACCAGAC
CAGATGATGA CTGTTCTGTG GTGGATTCCG ACAGGCCATA TACCCACGGT GAACGAAGCG
AAAGAACGAC TCCAGCTTCT AAATTCAAAC GGACCTGGTC CGCTGGCATT TACGTTCCGG
GATGTTTGGC CAGCACCTAA CGTGGATTTT GACACAAGTA AAGAATTAGC GTAA
 
Protein sequence
MQLAQLNISR MLAPDINHPI MADFVAQLDT INKLAEQSDG FIWRLTGEGN DATSLRPFDD 
ERIIVNMSVW ASLEQLQTFV FKSAHTPVMK DRRKWFEKPD QMMTVLWWIP TGHIPTVNEA
KERLQLLNSN GPGPLAFTFR DVWPAPNVDF DTSKELA