Gene Slin_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1604 
Symbol 
ID8725338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1932797 
End bp1933714 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_003386451 
Protein GI284036521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.955062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.261667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGTA TTAAATTTTA CATTGTCGAT GTATTTGCGT CAAGTCGGTA TGAAGGCAAT 
CAGCTTGCGG TGTTTCTCGA TATGAATAAT CAGCTTAGTG ACCGCCAGAT GCAGCAGATT
GCCAGGGAAA TCAACTTCGC CGAGACAACC TTTATAAAAG CGGACAACGG CAACCTTCGA
TTCACGGTTC GGATCTTTAC CCCGGAGCAT GAGGTTCCCT TTGCCGGTCA TCCATCGTTG
GGAACGAGCT ATGTCATCAA TAAATTTATT CTGCCCCAGG CCAGCCCAAC CCTAACCCTG
GAACTTGCTC ACAGCGACAT TGCTATTTCT GTAGACGATC CGGCCAACCT GGACGAAAGT
ATCTTCTTCA TGCGCCAGGC GCAACCCACG TTTGGCCTTG TGTTTACGGC CGACGAGATT
GCCACTGAAT TAGGCATTCC CCGCGATGCC CTTAACGACA CGCTACCCAT TCAGGAAATC
AGTACGGGCC TGCCTTACAT CATTATTCCC CTCAAAAGCC GCGCGGCAAT TGACACCCTG
TCGCTGAAAC TTGAGCCCTT CATCGCCTTT TTAACGGCCC GGCAAATGTA TAAGACCAAC
AGTCCGACCG GCCATTCTAC TTCGCTGTTT TTCTTTACCA GCGAGACCCA TGAAGCAGGC
AATGCGTATA ACACCCGAAT GCTGCTGATC GAAAACGATA AGGTTATGGA AGATGCAGCT
ACCGGGAGTG CCAACGGCTG CTTTCTGGCA TACCTTTTAT CGAACGTATG CGACAATATT
ACGGCAACTG TAGAACAGGG ATTTCAGATG AAACGGAAAT CTTATCTTTA TCTGGATGGG
CGTTTAGCCG ACGGGACTTA TGAGATAAAT GTTGGCGGAC GCAGCAAACT GGTAGCTGAA
GGAATGTGGT ATATCTGA
 
Protein sequence
MQGIKFYIVD VFASSRYEGN QLAVFLDMNN QLSDRQMQQI AREINFAETT FIKADNGNLR 
FTVRIFTPEH EVPFAGHPSL GTSYVINKFI LPQASPTLTL ELAHSDIAIS VDDPANLDES
IFFMRQAQPT FGLVFTADEI ATELGIPRDA LNDTLPIQEI STGLPYIIIP LKSRAAIDTL
SLKLEPFIAF LTARQMYKTN SPTGHSTSLF FFTSETHEAG NAYNTRMLLI ENDKVMEDAA
TGSANGCFLA YLLSNVCDNI TATVEQGFQM KRKSYLYLDG RLADGTYEIN VGGRSKLVAE
GMWYI