Gene Slin_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1603 
Symbol 
ID8725337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1931576 
End bp1932778 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content51% 
IMG OID 
Productchromate transporter, chromate ion transporter (CHR) family 
Protein accessionYP_003386450 
Protein GI284036520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.312378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCAT ACCTGTCCAC TGTTCAGCCC GTACGCCGAA TTCGTTATAT CATCTTTTTA 
AAAGATGTGC TGATTCTGGC GCTGACAACT TTTGGTGGAC CGCAGGTGCA TCTGGCTATG
TTTTATGAAC GGCTGGTGCA AAAACGGCGC TACCTTACTG AAGACGAACT ACTGGAACTG
AACGCATTGG GACAGGTATT ACCGGGGCCG ACGTCTACGC AAACCATAAC AGCCATTGGT
TTCAAAATTG GCGGTCCAAA TCTGGCTTAC ATTACACTGC TGGTTTGGAT TTTGCCTGCT
GTATGTATAA TGACAGCCGC CGGGATGGGG ATTTATTACC TGGAACAGCA CCACTTGTCG
TTGCAGTTTG CCCGATTTAT TCAGCCAATG GCCGTGGGTT TCATGGTCGT GGCGGGGTAC
AGGATTGGAC AAAAGGTTAT AAAAAATCAG GTCAGTCTGG CTTTGGCGCT GATTGCCGTC
GTTGTGGCTT ATCTGTTTCG GTCGCCCTTT ATGACGCCAA TTGTTATTGC GGTAGGAGGG
TTGACGACGG CACTAACTTA CGAAAAACAG AAACGAATGG AGAAAAAGCC CCTGCGCGTG
CAGTGGTCCA ACTTTTTTCT GTGGCTGGGT GTGTTTGTAG GGGCCGCTAC ACTGGGAGCG
TATACTCAAT CGCTGCCCGT TCGCCTGTTT GAAAACTTCT ACCGCAATGG CAGCTTCGTT
TTTGGGGGAG GGCAGGTGTT GACGCCTATG TTATATAACG AGTTCGTTGC CTTTAAGCAT
TATTTATCAC GCGAAGAGTT TTTGTCGGGC CTGGGTTTGG TGCAGGCCGT TCCTGGACCA
GTCTTTGCGT TTGCGTCTTA CATTGGGGTA TTATCCATGC GTGATTCCGG TATGCACGGC
CAACTTTGGG GAAGCTTGGT ATCGACTGCC GGAATTTTCC TGCCCGGCAC GTTTCTGATT
TTCTTTGTTT ATCGATTCTG GGAGCAACTC AAGCGCTACC GGGTTGTTCG GGCATCTCTG
GAAGGGATCA ATGCCGCCAG CACGGGCTTA ACGGCCGCAG CGGCTTTGGC ACTTTTCGAG
CCCATGGCGA CCCACTGGTC ATCTGTGGTG GTGGTGGTCT CAACCATTGC TGTGCTCCTG
TACACGAAAA TTCCGCCCTA TGTGTTGATT CTGGTAGGCT TGCTGACCGG CGTGATTTTG
TAA
 
Protein sequence
MLPYLSTVQP VRRIRYIIFL KDVLILALTT FGGPQVHLAM FYERLVQKRR YLTEDELLEL 
NALGQVLPGP TSTQTITAIG FKIGGPNLAY ITLLVWILPA VCIMTAAGMG IYYLEQHHLS
LQFARFIQPM AVGFMVVAGY RIGQKVIKNQ VSLALALIAV VVAYLFRSPF MTPIVIAVGG
LTTALTYEKQ KRMEKKPLRV QWSNFFLWLG VFVGAATLGA YTQSLPVRLF ENFYRNGSFV
FGGGQVLTPM LYNEFVAFKH YLSREEFLSG LGLVQAVPGP VFAFASYIGV LSMRDSGMHG
QLWGSLVSTA GIFLPGTFLI FFVYRFWEQL KRYRVVRASL EGINAASTGL TAAAALALFE
PMATHWSSVV VVVSTIAVLL YTKIPPYVLI LVGLLTGVIL