| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1601 |
|---|
| Symbol | |
|---|
| ID | 8725335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1929693 |
|---|
| End bp | 1930388 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Superoxide dismutase |
|---|
| Protein accession | YP_003386448 |
|---|
| Protein GI | 284036518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.350002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCT CCGAGTTTTT GAAATTGGCC TTCGGTGCAT CGGCCGGTTT AGTTGCCTTC
CGTTCGTTCG GTCTTGCACC TGCTCAGGCA GAAGGACCCT TTAAACTGGC CCCATTGCCA
TACGATGCGG GTGCCCTTGA ACCGCACATC GACAAAATGA CCATGGAAAT CCACCATGGC
AAACACCACA AAGCCTATGT CGATAATCTC AACAAGGCCG TTGCCGGTAC TGATATGGCA
AAGATGGATA TCGATGCACT GGTGAAAAGC ATAAGCAGCA GTACACCAGC CGCTGTTCGG
AACAATGGAG GTGGGCACTG GAATCATACC TTCTTCTGGA ACATTATGGG CCCTAATGCG
GGTGGTGCAC CAAAAGGCGC ACTGGCCGAC GCCATCAACA AGAAATATAC CTCGTTCGAC
AACTTCAAAG CTGAATGGGC GAAAGCGGCT ACCGGTCGAT TCGGTTCGGG CTGGGTTTGG
CTGATCAAAA ATGGCAACGA TGTTGAAATC GTCTCGACGC CTAATCAGGA TAATCCGTTA
ATGGCCCTGG CTGAGAAAAA AGGAACGCCT GTGCTCGGAC TCGACGTGTG GGAACACGCC
TATTACCTGA AGTACCAGAA TCGTCGGCCG GAGTACGTTA CGGCATTCTG GAACGTTGTC
GACTGGAACA AAGTCGGTAA GAACTTCGGA GCCTAA
|
|---|
| Protein sequence | MNRSEFLKLA FGASAGLVAF RSFGLAPAQA EGPFKLAPLP YDAGALEPHI DKMTMEIHHG
KHHKAYVDNL NKAVAGTDMA KMDIDALVKS ISSSTPAAVR NNGGGHWNHT FFWNIMGPNA
GGAPKGALAD AINKKYTSFD NFKAEWAKAA TGRFGSGWVW LIKNGNDVEI VSTPNQDNPL
MALAEKKGTP VLGLDVWEHA YYLKYQNRRP EYVTAFWNVV DWNKVGKNFG A
|
|---|
| |