Gene Slin_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1600 
Symbol 
ID8725334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1928881 
End bp1929492 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content51% 
IMG OID 
Productrecombination protein RecR 
Protein accessionYP_003386447 
Protein GI284036517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.351131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAATACC CATCCAAACT CATAGAAGAC GCGGTGAACG AGGTGTCGAA ACTGCCGGGT 
ATCGGGAAAA AAACCGCTCT CCGGCTGGTG CTGCATCTGC TTAAACGCGA TGAAGAACAA
ACCGAAACGC TGGCCCAGAG TTTGACGGCC ATGCGTACCA ATGTGAAGTA CTGTCGTAAA
TGCCATAACC TCTCGGATAA TGAGGTATGC ACCATATGCG CCAGTAACAA ACGTGACCAG
TCCCTGATTT GTGTGGTAGA AGATACCCGC GATGTATTAG CGATTGAAAA TACAGCCCAG
TATCGTGGCC TATATCATGT GCTGGGTGGT ATTATCTCAC CCGTAGAAGG CATTGGCCCC
AGCGATTTGC AGATCGACTC CCTTATGAAC CGCCTGCGCG ATGCCGGAAG CGAACAAGTG
CGCGAAATCA TTCTGGCGAT CAGTCCTACG ATGGAAGGAG ACACAACGGC GTTCTATCTT
CAGAAGAAAC TTAAGCCGTT CAATCTCAAA ATTTCAACCA TTGCCCGCGG AGTTCCTATC
GGGGGCGACC TTGAGTATGC CGATGAGGTG ACACTGGGCC GCAGCATTCT GAGTCGGATT
GCCTACGATT AA
 
Protein sequence
MEYPSKLIED AVNEVSKLPG IGKKTALRLV LHLLKRDEEQ TETLAQSLTA MRTNVKYCRK 
CHNLSDNEVC TICASNKRDQ SLICVVEDTR DVLAIENTAQ YRGLYHVLGG IISPVEGIGP
SDLQIDSLMN RLRDAGSEQV REIILAISPT MEGDTTAFYL QKKLKPFNLK ISTIARGVPI
GGDLEYADEV TLGRSILSRI AYD