| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1588 |
|---|
| Symbol | |
|---|
| ID | 8725322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1917088 |
|---|
| End bp | 1917957 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2179 |
|---|
| Protein accession | YP_003386436 |
|---|
| Protein GI | 284036506 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.772407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.342251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCTC AAACTTCTTC TTTTCGTATT ATAAAGGATA CTGTTTTTAT TACTGCCGGT
GTGCTCAGTG CTGGCATGGG GATCAAAGGC TTTTTGCTGT CAAGCCATTT CATTGACGGG
GGAGTCACGG GGATATCCAT GCTGCTGGCA TCGCTCATAA ATATTCCCCT ACCCATCTGG
CTGCTGGTGA TTAATCTGCC GTTCATTGGC CTTGGCTATA GGCAGTTTGG CCGACAGTTT
GCACTTAAAA GTATATTGGC CATTACGGGT CTATCGATTA GCCTGGCCAT TATCCCCTAC
CCGGATGCCA CCCCGGATTT GCTGCTGACA GCAGTTTTTG GCGGTTTTTT TATAGGAGCC
GGTATTGGAT TAGCGATGCG GGGGGGTGCT GTACTGGACG GAACAGAAAT TGCCGCTTTA
CTCATCAGCC GGAGTAGCCC TGTTCTGAAA GTGAGTGATG TTATTCTGAT TCTTAATGTC
CTGATTTTTG GAGCTGCTGC TTTTTTTCTG GGACTAAATC CGGCCCTTTA CTCGATGATT
ACCTATTTTG CTGCCTCCAA AACGGTGGAT TTTCTCATTC ACGGTATTGA AGAGTATACC
GCTATTCTTA TTATTTCTAA GCAAAACGAA GACATTCGGG AAAAAATCAT CGAACGGGGA
TGGGGTATTA CCATTCTGAA AGGTCAGGGT GGATACGGCA AACACGGCAG TCACCAGGAG
ATAGATACGG TACTCTACAC CGTAATCACC CGACTCGAAA TCAGTCGATT AAGAACATTG
GTACTCCAGA TTGACCCGAA AGCGTTCATC ATACAACACA GCGTTGACGA CGTGGCGGGG
GGTAAAGTAA AGAGTTTACC CATGCACTAA
|
|---|
| Protein sequence | MIAQTSSFRI IKDTVFITAG VLSAGMGIKG FLLSSHFIDG GVTGISMLLA SLINIPLPIW
LLVINLPFIG LGYRQFGRQF ALKSILAITG LSISLAIIPY PDATPDLLLT AVFGGFFIGA
GIGLAMRGGA VLDGTEIAAL LISRSSPVLK VSDVILILNV LIFGAAAFFL GLNPALYSMI
TYFAASKTVD FLIHGIEEYT AILIISKQNE DIREKIIERG WGITILKGQG GYGKHGSHQE
IDTVLYTVIT RLEISRLRTL VLQIDPKAFI IQHSVDDVAG GKVKSLPMH
|
|---|
| |