Gene Slin_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1581 
Symbol 
ID8725315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1909120 
End bp1909863 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function DUF159 
Protein accessionYP_003386429 
Protein GI284036499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0117565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0972934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTTTC ATAAATCGCT CAATGTCAAA GCAGAGGAGC TGGAGGCTCG TTATGAGGCT 
GTGTTACCAC CAACGGCTAA CTTTCAGCCC GTTTATCACG CCAATGCGTA TAATTTCCCT
GTCTGGCCGA TTGTTACACG GCAGGAGCCG GGAAAATTGC AACTGATTCA TTGGGGACTT
ATTCCGCGCT GGGCGCGAAC GAAAGAGGAT GCGACTGATA TCCGCACCAA AACGATCAAC
GCCCGCTCCG AAACCATTTA TGAAAAACCT TCATTTAAAT CGGCGGCACA GGCGGGCAAA
CGCTGCCTGA TTCCGGTAAC CGGCTTTTTT GAGTGGTATA CACAAGGAAG TAAGAAGTAT
CCATTCTACA TTTATTCCAG CGATCAGAAA ATTAGCTCTA TTGCGGGTTT ATGGGACGAA
TGGCCCGACC CTGAAACAGG CGAACTGGTG CCAACTTATA CGCTCCTCAC CACAGAGGCT
AACCCGCTTC TGGCCGCGAT ACACAATACC AAAAAGCGAA TGCCGTGTGT CCTGACTCCC
GACGCCGAAC ATGCCTGGCT GCACGATGAT CTGTCCGAAA AAGACACGTT GGCGTTGCTG
GAAAAACCTT ACCCGGCCAG TAAAATGCAT AGCTACAGCA TTAGTAAACG GATCACATCC
AGAAGCGAAC CCAGCGATGT TCCGGAAGTG CTGACACGTA CCGATTACCC GGAATTAAGT
AGTAATCCTC AGTTGTTTAG CTAG
 
Protein sequence
MCFHKSLNVK AEELEARYEA VLPPTANFQP VYHANAYNFP VWPIVTRQEP GKLQLIHWGL 
IPRWARTKED ATDIRTKTIN ARSETIYEKP SFKSAAQAGK RCLIPVTGFF EWYTQGSKKY
PFYIYSSDQK ISSIAGLWDE WPDPETGELV PTYTLLTTEA NPLLAAIHNT KKRMPCVLTP
DAEHAWLHDD LSEKDTLALL EKPYPASKMH SYSISKRITS RSEPSDVPEV LTRTDYPELS
SNPQLFS