Gene Slin_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1575 
Symbol 
ID8725309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1905303 
End bp1906190 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID 
ProductMethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_003386423 
Protein GI284036493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.251532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0116003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTC TTGACGGTAA GTTTCTTTCG GCACAAATAA AACAGGAAAT CGCGGCTGAG 
GTCGCACAGA TTAAAGAGCA GGGTGGCAAA ATTCCGCACC TGGTCGCTAT TCTGGTGGGT
AACAAAGGAG CTTCAGAAAC CTATGTTGCC TCTAAAATGA AAAACTGCGA AGAGGTTGGT
ATGCACTCCA CCCTCATCCG ATTCGACCCG TCGGTTACGG AAGAGGAACT GCTCGCCAAA
GTTCGTGAAG TGAACGAAAA CCCCGATATG GACGGACTGA TCGTCCAGCT TCCCCTCCCC
GATCATATTA ACCCCGACCG TGTGATGGAA ACCATCAACC CCGCCAAAGA CGTGGATGGT
TTTCACCCGA TCAACATCGG TCGTATGGCG AAAGGATTAC CCGCTTACAT ATCGGCGACG
CCACAGGGTG TTCTGGAAAT GATCAAACGC TACGACATCA AAACCGCAGG AAAGCACTGC
GTCGTTGTGG GTCGAAGCCA GATTGTAGGT CTGCCGATGT CCATCCTGAT GCAGCGGAAC
ACCTATCCGG GCAACTGCAC CGTAACCATT ACCCACAGCC GCACGCAGAA TCTCGCTGAG
ATATGCCGCT CTGCCGATAT TCTGGTAGCC GCCCTGGGTA AACCCGAGTT CGTAACGGCC
GACATGGTAA AAGAAGGCGC GGTGGTTATC GACGTTGGTC TGGAGCGGGT ACCGGATGCC
AGCAAAAAAA GTGGTTTCTC CCTCAAAGGC GATGTCAAAT TCGACGAAGT AGCGCCAAAA
ACCAGCTTCA TCACTCCTGT TCCGGGCGGA GTTGGCCTGA TGACCATCTG CTCACTCATG
CAGAATACGC TGAAAGCTGC CCGTGGGGAG ATTTATCCGT CAATCTGA
 
Protein sequence
MQLLDGKFLS AQIKQEIAAE VAQIKEQGGK IPHLVAILVG NKGASETYVA SKMKNCEEVG 
MHSTLIRFDP SVTEEELLAK VREVNENPDM DGLIVQLPLP DHINPDRVME TINPAKDVDG
FHPINIGRMA KGLPAYISAT PQGVLEMIKR YDIKTAGKHC VVVGRSQIVG LPMSILMQRN
TYPGNCTVTI THSRTQNLAE ICRSADILVA ALGKPEFVTA DMVKEGAVVI DVGLERVPDA
SKKSGFSLKG DVKFDEVAPK TSFITPVPGG VGLMTICSLM QNTLKAARGE IYPSI