| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1574 |
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| Symbol | |
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| ID | 8725308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1902062 |
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| End bp | 1905061 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | glycosyl hydrolase, BNR repeat-containing protein |
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| Protein accession | YP_003386422 |
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| Protein GI | 284036492 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0267092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTAC ATTACACCCT CAACCGGCTA TTTTTAGGCC TGACATTCAT CTTTTCCGCC
GTTACCCTAC ACGCGCAGCC TTTCTCGTCA AAGTTATTTG ATGCCATGAA ATGGCGGATG
ATTGGTCCGC ATCGGGGCGG CCGGACGGTT GGCGCTACCG GTGTTCCTCA GCAACCCAAC
GTCTTCTACA TCGGTGTAAA CAATGGTGGC GTCTGGAAAA CGACGGACTA TGGCCGTACA
TGGGTGCCCA TTTTTGATGA TCAGCCAACT GGTTCTATCG GCGATGTCGC GGTAGCACCC
TCAAATCCGG ATGTGGTGTA CGTTGCCAGT GGCGAGGGGC TGCAACGGCC CGACCTGTCG
GTGGGGAATG GGATGTATAA ATCGACGGAT GCTGGGAAGA CCTGGGCGTT TCTGGGCCTT
AAAGACGGGC AGCAGATTGG CGGTATCAGT ATCGATCCAA CCAACGAGAA CCGGGTTTTT
GCGGCTGTAC TCGGTCATCC ATACGGCCCC AATACCGAAC GGGGTGTTTA CCGAACCGTC
GATGGCGGCA AAAAATGGGA ACGGGTGCTG TATAAAGATG AAAATACAGG CGCTGTTCAG
GTAACCATTG ATCCAAAGAA TCCGAATATC GTGTACGCCG ATCTTTGGGC GGCTCGTCAG
GGACCCTGGG AAAACGGGCA GTGGCAAGGG CCGGAAAGTG GTCTGTTCAA ATCGACGGAT
GGCGGGACAA CCTGGCAAAA ACTGACCAAC GGCTTGCCTA CGGTTGAGCA GGGCCTGGGA
CGGATTGGCT TCTGCATTGC CCCGAGTGAG CCCAATCGGC TATATGCAAC GGTCGACGCG
CCCGAACTCG GTGGGGTGTA TCGCTCCGAT AATGCAGGCC AGTCCTGGAC ACGAATCAAT
AACGACCAGC GGCTTTGGGG GCGGGGGAGC GACTTTGCGG AGGTAAAAGC GCATCCAACC
AATCCTGATA TTGTGTTTAT CGCCGATGTT GCCGCCTGGA AATCGACCGA TGGCGGCAAA
ACCTGGAACG ACTTCCGCGG GGCACCCGGT GGCGACGATT ATCACCGACT ATGGATTAAC
CCTAACGATC CCAATACCCT GCTTCTGGCG GGCGATCAGG GCGGTATCGT CACCGTTAAC
GGCGGGCAGA CATTCAGTTC GTGGTACAAC CAGCCTACGG CGCAATTCTA CCATGTGAGT
ACTGATAATA GCTTTCCGTA TAATGTTCTG GGTGGCCAGC AGGAGAGTGG TTCGGTCGGT
ATAGCCAGTC GGGGAAACGA CGGGCAGATC ACGTTTCATG ACTGGCACCC GGTAGGCGTG
GAAGAATACG GCTACGTGGC TGCCGACCCG CTCGATCCAA ATATTATTTA CGGCGGTAAA
GTGACAAAAT TCGACAAACG AACCGGGCAG GTGCAGAACA TAGCCCCCGA AGCGGTTCGT
TCGGGTAAAT ACCGCTTTGT CAGAACTGCT CCGGTACTCT TTTCGCCCAT TGACCCTAAA
GAGCTTTACT TCGCCGGAAA CGTCCTGTTC AAGACCCGCG ATGGTGGCAA CAGTTGGCAG
GTTATCAGCC CCGACCTGAC GCGGACGTCC TACCCCGACA TTCCCGAAAG CGTGGGCGTG
TATCGCACGG CTGATATGAC TACTATGCCC GCCCGGGGTG TCATTTATAC TATCGCGCCT
TCGCATAAAA CAATTAACAC AATTTGGGTA GGAACTGATG ATGGACTGAT TCAGATTACC
CGTGATGGCG GTAAAATATG GAAAAATATA ACCCCGCCGG GTGTGGGTTC CTGGAGTAAA
GTTTCGCTTA TCGACGCCGG TCATTTCGAC GACAACACCG CCTATGCCGC CGTGAATCGG
ATTCGCTGCG ACGACCTGCG TCCTCATATT TACCGAACAC ACGACGGGGG TAAAACTTGG
CAGGAGATTG TAAGCGGTTT GCCCAATGAC CCCATTAATG CCGTTCGTGA AGACCCCTCC
CGGAAAGGGC TGCTGTTTGC CGGGTCGGAA ACCGCCGTGC ATGTTTCGTT CGATGATGGC
GATCATTGGC AACCGCTGCG GCTCAATATG CCCGCCACCT CGATTCGCGA TCTGGTCATT
AAAGATGATG ATCTGGTAGT AGGTACACAT GGTCGGTCAT TCTGGATTCT GGACGACATT
ACCCCGTTAA GACAACTGAC CGCTGATCTG GCAAAGGCTG AAACGATCCT GTATAAACCC
CAGCGGGCCT ACCGGGTCCG CTGGAACATG AACCCCGATA CGCCGTTGCC GCAGGAAGAA
CCCGCCGGGC AGAATCCACC CGATGGCGCC GTTATTGACT ATTTTCTAAA GGAAAACGCC
GGTCAGGTTG TAACGCTGAC AATTAAGGAA GCGGCTGGTG CGATTGTCAG GCAATTCAGC
AGTGACGATA AACCCTACGA TGTGCCCGAT GTAAATCTGC CCGCCTATTG GATTCGGCCG
CAACAGATTC TGTCGGGAGG GGCTGGTTCG CACCGGTTCA TGTGGGATCT GCATTACACA
CCTATGCCCG GTCCACCTTC CTATCCAATT GCGGCAACTT ATCACCAAAC GGCCCCTGAG
TTCACTTCGC CCTGGGTCAT GCCCGGTACC TACACGGTGA CTTTGACGGT GGGCGGCAAA
TCGTACACCC AGCCCCTAGT CGTGACCATG GACCCTCGGG TAAAAACGAG TCTGGTCGCG
CTGAAACAGC AACACGATCT GTCGGTCATT GTGTTCGAGG GGCGGAAAAG CGTCATGGCT
TTACAAAAAG AAGCGCAGGA CTTCAAGGGC CGTTCGATGA CGGACACCCA AAAAAAGACA
TTCAGTACAT TACAAATGAC CCTGAACGGA CTAAACAGAG CGTTTAGTTC GCTGTTTGGT
ACCCTTCAGG ATGCCGATAT GCCACCCACT ACACAGGCTG TAGCTGCCGT GAAGGAAGCG
CAATCCGTTT TTGGAAAACT GGTGGGTGAG TGGAAAGCCT GGAAAAGCAC AGTACGCTAA
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| Protein sequence | MIVHYTLNRL FLGLTFIFSA VTLHAQPFSS KLFDAMKWRM IGPHRGGRTV GATGVPQQPN
VFYIGVNNGG VWKTTDYGRT WVPIFDDQPT GSIGDVAVAP SNPDVVYVAS GEGLQRPDLS
VGNGMYKSTD AGKTWAFLGL KDGQQIGGIS IDPTNENRVF AAVLGHPYGP NTERGVYRTV
DGGKKWERVL YKDENTGAVQ VTIDPKNPNI VYADLWAARQ GPWENGQWQG PESGLFKSTD
GGTTWQKLTN GLPTVEQGLG RIGFCIAPSE PNRLYATVDA PELGGVYRSD NAGQSWTRIN
NDQRLWGRGS DFAEVKAHPT NPDIVFIADV AAWKSTDGGK TWNDFRGAPG GDDYHRLWIN
PNDPNTLLLA GDQGGIVTVN GGQTFSSWYN QPTAQFYHVS TDNSFPYNVL GGQQESGSVG
IASRGNDGQI TFHDWHPVGV EEYGYVAADP LDPNIIYGGK VTKFDKRTGQ VQNIAPEAVR
SGKYRFVRTA PVLFSPIDPK ELYFAGNVLF KTRDGGNSWQ VISPDLTRTS YPDIPESVGV
YRTADMTTMP ARGVIYTIAP SHKTINTIWV GTDDGLIQIT RDGGKIWKNI TPPGVGSWSK
VSLIDAGHFD DNTAYAAVNR IRCDDLRPHI YRTHDGGKTW QEIVSGLPND PINAVREDPS
RKGLLFAGSE TAVHVSFDDG DHWQPLRLNM PATSIRDLVI KDDDLVVGTH GRSFWILDDI
TPLRQLTADL AKAETILYKP QRAYRVRWNM NPDTPLPQEE PAGQNPPDGA VIDYFLKENA
GQVVTLTIKE AAGAIVRQFS SDDKPYDVPD VNLPAYWIRP QQILSGGAGS HRFMWDLHYT
PMPGPPSYPI AATYHQTAPE FTSPWVMPGT YTVTLTVGGK SYTQPLVVTM DPRVKTSLVA
LKQQHDLSVI VFEGRKSVMA LQKEAQDFKG RSMTDTQKKT FSTLQMTLNG LNRAFSSLFG
TLQDADMPPT TQAVAAVKEA QSVFGKLVGE WKAWKSTVR
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