Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1553 |
Symbol | |
ID | 8725287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1868210 |
End bp | 1869697 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003386401 |
Protein GI | 284036471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.215812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTG TCCATAATGC CACGCAGAAC GTTGACTTAA CGGCCATCGT TTCTGACGGT AAATCCTACT CGTATCAGCA GTTACTCGAC TCATCCGGCG CTTTTGCTTC GCTCTTGCTA AACGGCGCTA CCGATCTTAA CGAAGCCCGT GTCGCCTTCA TGGTTGCGCC AGGTTTCGAT TATGTAAAAG TGCAATGGGG CATCTGGCGG GCTGGGGGCG TAGCGGTACC GCTGGCACTA TCGTATCCAT TGCCGTCGCT GCGTTACGTC ATTGAAGATA CGGGTGCCCG GATCGTCGTG GTCGATCAAA CCTTTGGGAC GCTGCTGGCT CCTCTGGCAG CCGAAAAAGG CTGTCGATTG ATTATTTTAG GTGAAGAAGG GAATACTGTC ATTGATAAAC CACTGCCCGA ATTGACCCCC GAACGCCGGG CGATGATTCT GTATACGAGT GGTACCACCA ACCTGCCCAA AGGGGTTGTC ACAACCCACG CCAACCTCGA AGCGCAGATT TCGACGCTGG TAGAGGTCTG GCAATGGTCG TCCAGCGATC ATACATTATG CGTGTTGCCA CTCCACCACG TACATGGCAT CATCAACGTA ATTTGCTGTG CGCTTTGGTC GGGTGCCACC GTTGAGTTCA TGCCTAACTT CTCGGCCGAA GGTGTTTTTA ACACGTTTCA GCAAGGGCAT ATCAATGTCT TCATGGCCGT GCCGACGATC TATTTCAAGC TCATCGCTTA CTGGGAAAGC TTGCCCGTCG ATCAGCGGCA TCAGATCACC GAAACCCTTG CCAAATTCCG GCTTATGGTG TCGGGCTCGG CAGCTTTGCC GGTGTCGGTA ATGGAGAAAT GGAAAACGGT GAGCGGCCAC ACGCTGCTCG AACGTTACGG CATGACCGAA ATCGGGATGG GCATCAGCAA TCCCTACGAC GGTGAACGAC GGGTAGGGTA TATTGGCAAA CCCCTGCCGG GAGTTGGCGT TCGGTTGGTG GATGAGAACA ATGCCGAAGT CGCCGATGGA CAACCAGGCG AGATCCAGAT AAAAGGCGCG ACCGTTTTTC TGGAATACTG GAACCGCCCC GAAGCGACGC AAAAAGCCTT TACCGAAGAT GGCTGGTTCC AAACGGGCGA TATTGCCGTG GTCGAAGACG GCTACTACCG CATGTTGGGC CGCGATTCCA TCGACATCAT TAAATCCGGC GGCTACAAGA TTTCAGCCCT CGAAATCGAA GAAGTACTGC GGACGCACTC CGCTATCAGC GATTGCAGTG TAGTCGGCAT TCCCAACGAA GAATGGGGAG AATTAGTGGC GGCTGTAGTT ATCCTGACCG ATAAAATGGT GTCGCCGGAG CATATCAGCA GCTGGCTGCG CGAACGAATG CCTGCCTACA AAGTGCCCCG ACAATATCGC GTAGCCGACG ATCTGCCCCG TAACGCAATG GGTAAAGTTA CCAAGAACGA CCTCAAGCCG TTGTTTAATG TACAATGA
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Protein sequence | MQLVHNATQN VDLTAIVSDG KSYSYQQLLD SSGAFASLLL NGATDLNEAR VAFMVAPGFD YVKVQWGIWR AGGVAVPLAL SYPLPSLRYV IEDTGARIVV VDQTFGTLLA PLAAEKGCRL IILGEEGNTV IDKPLPELTP ERRAMILYTS GTTNLPKGVV TTHANLEAQI STLVEVWQWS SSDHTLCVLP LHHVHGIINV ICCALWSGAT VEFMPNFSAE GVFNTFQQGH INVFMAVPTI YFKLIAYWES LPVDQRHQIT ETLAKFRLMV SGSAALPVSV MEKWKTVSGH TLLERYGMTE IGMGISNPYD GERRVGYIGK PLPGVGVRLV DENNAEVADG QPGEIQIKGA TVFLEYWNRP EATQKAFTED GWFQTGDIAV VEDGYYRMLG RDSIDIIKSG GYKISALEIE EVLRTHSAIS DCSVVGIPNE EWGELVAAVV ILTDKMVSPE HISSWLRERM PAYKVPRQYR VADDLPRNAM GKVTKNDLKP LFNVQ
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