Gene Slin_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1553 
Symbol 
ID8725287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1868210 
End bp1869697 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003386401 
Protein GI284036471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.215812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTG TCCATAATGC CACGCAGAAC GTTGACTTAA CGGCCATCGT TTCTGACGGT 
AAATCCTACT CGTATCAGCA GTTACTCGAC TCATCCGGCG CTTTTGCTTC GCTCTTGCTA
AACGGCGCTA CCGATCTTAA CGAAGCCCGT GTCGCCTTCA TGGTTGCGCC AGGTTTCGAT
TATGTAAAAG TGCAATGGGG CATCTGGCGG GCTGGGGGCG TAGCGGTACC GCTGGCACTA
TCGTATCCAT TGCCGTCGCT GCGTTACGTC ATTGAAGATA CGGGTGCCCG GATCGTCGTG
GTCGATCAAA CCTTTGGGAC GCTGCTGGCT CCTCTGGCAG CCGAAAAAGG CTGTCGATTG
ATTATTTTAG GTGAAGAAGG GAATACTGTC ATTGATAAAC CACTGCCCGA ATTGACCCCC
GAACGCCGGG CGATGATTCT GTATACGAGT GGTACCACCA ACCTGCCCAA AGGGGTTGTC
ACAACCCACG CCAACCTCGA AGCGCAGATT TCGACGCTGG TAGAGGTCTG GCAATGGTCG
TCCAGCGATC ATACATTATG CGTGTTGCCA CTCCACCACG TACATGGCAT CATCAACGTA
ATTTGCTGTG CGCTTTGGTC GGGTGCCACC GTTGAGTTCA TGCCTAACTT CTCGGCCGAA
GGTGTTTTTA ACACGTTTCA GCAAGGGCAT ATCAATGTCT TCATGGCCGT GCCGACGATC
TATTTCAAGC TCATCGCTTA CTGGGAAAGC TTGCCCGTCG ATCAGCGGCA TCAGATCACC
GAAACCCTTG CCAAATTCCG GCTTATGGTG TCGGGCTCGG CAGCTTTGCC GGTGTCGGTA
ATGGAGAAAT GGAAAACGGT GAGCGGCCAC ACGCTGCTCG AACGTTACGG CATGACCGAA
ATCGGGATGG GCATCAGCAA TCCCTACGAC GGTGAACGAC GGGTAGGGTA TATTGGCAAA
CCCCTGCCGG GAGTTGGCGT TCGGTTGGTG GATGAGAACA ATGCCGAAGT CGCCGATGGA
CAACCAGGCG AGATCCAGAT AAAAGGCGCG ACCGTTTTTC TGGAATACTG GAACCGCCCC
GAAGCGACGC AAAAAGCCTT TACCGAAGAT GGCTGGTTCC AAACGGGCGA TATTGCCGTG
GTCGAAGACG GCTACTACCG CATGTTGGGC CGCGATTCCA TCGACATCAT TAAATCCGGC
GGCTACAAGA TTTCAGCCCT CGAAATCGAA GAAGTACTGC GGACGCACTC CGCTATCAGC
GATTGCAGTG TAGTCGGCAT TCCCAACGAA GAATGGGGAG AATTAGTGGC GGCTGTAGTT
ATCCTGACCG ATAAAATGGT GTCGCCGGAG CATATCAGCA GCTGGCTGCG CGAACGAATG
CCTGCCTACA AAGTGCCCCG ACAATATCGC GTAGCCGACG ATCTGCCCCG TAACGCAATG
GGTAAAGTTA CCAAGAACGA CCTCAAGCCG TTGTTTAATG TACAATGA
 
Protein sequence
MQLVHNATQN VDLTAIVSDG KSYSYQQLLD SSGAFASLLL NGATDLNEAR VAFMVAPGFD 
YVKVQWGIWR AGGVAVPLAL SYPLPSLRYV IEDTGARIVV VDQTFGTLLA PLAAEKGCRL
IILGEEGNTV IDKPLPELTP ERRAMILYTS GTTNLPKGVV TTHANLEAQI STLVEVWQWS
SSDHTLCVLP LHHVHGIINV ICCALWSGAT VEFMPNFSAE GVFNTFQQGH INVFMAVPTI
YFKLIAYWES LPVDQRHQIT ETLAKFRLMV SGSAALPVSV MEKWKTVSGH TLLERYGMTE
IGMGISNPYD GERRVGYIGK PLPGVGVRLV DENNAEVADG QPGEIQIKGA TVFLEYWNRP
EATQKAFTED GWFQTGDIAV VEDGYYRMLG RDSIDIIKSG GYKISALEIE EVLRTHSAIS
DCSVVGIPNE EWGELVAAVV ILTDKMVSPE HISSWLRERM PAYKVPRQYR VADDLPRNAM
GKVTKNDLKP LFNVQ