Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1551 |
Symbol | |
ID | 8725285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1866992 |
End bp | 1867750 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | malonate transporter, MadM subunit |
Protein accession | YP_003386399 |
Protein GI | 284036469 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0388918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTA TAACTCGGTT TCTTGAAAAA AATGGCCTGG TCGTCGCTTT TCTGACCGTG GGATTTATGA TGTATGCATC GGCCATCATT TCCAACAAGC TGACCAACAA AAAAATACCA GCTTCGGCTA TTGCCATTAT CATGGGCCTG ATACTGGCTT ACGTGGGGGG CATTTATTCG GGAGGTGAAA AAGGCATTGC CGATGTGAAA GTCTTCTCGG GTTTCGGGCT GATGGGCGGG GCCATGTTCC GCGATTTCGC CATCGTCTCG ACCGGTATGG GTGCCAGCTT TGTCGTCATG AAGCGTACGG GCTGGATTGG CGCATTGTCG TTGTTCCTGG GTATTGTGCT TTCGTTCATC GGGGGCGTTA TTGTGGCGCT TTTCTGGGGC TATACCGATG CCATTAGCCT GACTACTATT GGAGCGGGAG CCTGTACGTA TATTGTTGGG CCGGTAACGG GCGCTGCCAT TGGAGCCAGT TCCGATGTGG TTGCGCTGAG CATTGCTGCC GGTGTCGTGA AAGCGGTTTT TGTGACCATC GGCACACCGT TTGTAGCTCG GTTTATTGGC CTTAACAATC CACAAACGGC CATGGTGTAC GGTGGACTCA TGGGAACCAC CAGTGGTGTA TCGGCGGGTC TGGCCGCTAC GGACCCCAAG CTAGTGCCTT ATGGGGCGTT GACAGCTACT TTCTATACCG GCTTGGGCTG TCTGGCGTGT CCATCGGTGC TGTATTTGCT GATGCGGGTA GTTTTCTGA
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Protein sequence | MDIITRFLEK NGLVVAFLTV GFMMYASAII SNKLTNKKIP ASAIAIIMGL ILAYVGGIYS GGEKGIADVK VFSGFGLMGG AMFRDFAIVS TGMGASFVVM KRTGWIGALS LFLGIVLSFI GGVIVALFWG YTDAISLTTI GAGACTYIVG PVTGAAIGAS SDVVALSIAA GVVKAVFVTI GTPFVARFIG LNNPQTAMVY GGLMGTTSGV SAGLAATDPK LVPYGALTAT FYTGLGCLAC PSVLYLLMRV VF
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