Gene Slin_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1551 
Symbol 
ID8725285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1866992 
End bp1867750 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content53% 
IMG OID 
Productmalonate transporter, MadM subunit 
Protein accessionYP_003386399 
Protein GI284036469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0388918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTA TAACTCGGTT TCTTGAAAAA AATGGCCTGG TCGTCGCTTT TCTGACCGTG 
GGATTTATGA TGTATGCATC GGCCATCATT TCCAACAAGC TGACCAACAA AAAAATACCA
GCTTCGGCTA TTGCCATTAT CATGGGCCTG ATACTGGCTT ACGTGGGGGG CATTTATTCG
GGAGGTGAAA AAGGCATTGC CGATGTGAAA GTCTTCTCGG GTTTCGGGCT GATGGGCGGG
GCCATGTTCC GCGATTTCGC CATCGTCTCG ACCGGTATGG GTGCCAGCTT TGTCGTCATG
AAGCGTACGG GCTGGATTGG CGCATTGTCG TTGTTCCTGG GTATTGTGCT TTCGTTCATC
GGGGGCGTTA TTGTGGCGCT TTTCTGGGGC TATACCGATG CCATTAGCCT GACTACTATT
GGAGCGGGAG CCTGTACGTA TATTGTTGGG CCGGTAACGG GCGCTGCCAT TGGAGCCAGT
TCCGATGTGG TTGCGCTGAG CATTGCTGCC GGTGTCGTGA AAGCGGTTTT TGTGACCATC
GGCACACCGT TTGTAGCTCG GTTTATTGGC CTTAACAATC CACAAACGGC CATGGTGTAC
GGTGGACTCA TGGGAACCAC CAGTGGTGTA TCGGCGGGTC TGGCCGCTAC GGACCCCAAG
CTAGTGCCTT ATGGGGCGTT GACAGCTACT TTCTATACCG GCTTGGGCTG TCTGGCGTGT
CCATCGGTGC TGTATTTGCT GATGCGGGTA GTTTTCTGA
 
Protein sequence
MDIITRFLEK NGLVVAFLTV GFMMYASAII SNKLTNKKIP ASAIAIIMGL ILAYVGGIYS 
GGEKGIADVK VFSGFGLMGG AMFRDFAIVS TGMGASFVVM KRTGWIGALS LFLGIVLSFI
GGVIVALFWG YTDAISLTTI GAGACTYIVG PVTGAAIGAS SDVVALSIAA GVVKAVFVTI
GTPFVARFIG LNNPQTAMVY GGLMGTTSGV SAGLAATDPK LVPYGALTAT FYTGLGCLAC
PSVLYLLMRV VF