Gene Slin_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1544 
Symbol 
ID8725278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1861450 
End bp1862358 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003386392 
Protein GI284036462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.23402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.650646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG TAACGTTCAA AACCACCGCC GGGGAACAAA AGACCGGTTT GCTTACGGAA 
ACCGGCATTG TTGACCTGGC TAAAGCCAGC AATGGACAAC TGCCCAGCGA TATGCTAACG
CTTATCGACC AGTATGAACA CTGTGCCCCA ATCCTGAATG GATTACTGGA TGCCCGGCCG
GATTACGAAC TGGCGGAGGT AACACTGCTG GCTCCGCTGC CCAACCCGCG CTCTTTCCGG
GATTATGTAG CCTTTGAACA GCACATGCTC AATGCCGGTA AAACGTTCGG TCATGCGGTA
GCCCCGGTCT GGTACGAGAT GCCCATTTTC TATTTCACCA ACCACCAGGC CATTTCAGGC
ACAGGTCAGG CTATTGCCCG GCCACCCTTG TGCCGAAAGC TGGATTATGA GCTGGAGATG
GCCTGCATCA TCGGTAAACA AGGCGCAGAT ATTAAAGCCG AAGACGCCGA TGACTATATT
TTTGGCTATA CCATTTTCAA CGACTGGTCG GCTCGCGACA TTCAGGGGAA AGAGATGGGT
GTGCCGCTGG GACCGCATAA AGGCAAAGAT TTCGCCAATA CCATCGGGCC TTGTATCGTC
ACCAAAGACG AACTGAACCG GTACCGAACC ATCAACGACC GCTTCGACCT TCGCATGACG
TCCAAAATCA ACGGGCAACT TATCTGCGAC GGGAACTTCA AAACCATACA CTACACCTTC
GGGCAGATGA TCGAACGGGC GTCGGAGAAT GGCGTGACGC TGTACCCCGG CGATATACTT
GGTTCGGGCA CTGTCGGTTG GGGCAGCTTG ATCGAGACCA ACTTCACGGC TCACCGGCCG
CTGGAACCCG GCGACGAAGT GGAATTCGAG ATTGAAGGCA TCGGTATTCT GAAAAACATG
GTAATCTGA
 
Protein sequence
MKLVTFKTTA GEQKTGLLTE TGIVDLAKAS NGQLPSDMLT LIDQYEHCAP ILNGLLDARP 
DYELAEVTLL APLPNPRSFR DYVAFEQHML NAGKTFGHAV APVWYEMPIF YFTNHQAISG
TGQAIARPPL CRKLDYELEM ACIIGKQGAD IKAEDADDYI FGYTIFNDWS ARDIQGKEMG
VPLGPHKGKD FANTIGPCIV TKDELNRYRT INDRFDLRMT SKINGQLICD GNFKTIHYTF
GQMIERASEN GVTLYPGDIL GSGTVGWGSL IETNFTAHRP LEPGDEVEFE IEGIGILKNM
VI