Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1544 |
Symbol | |
ID | 8725278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1861450 |
End bp | 1862358 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_003386392 |
Protein GI | 284036462 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.23402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.650646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTG TAACGTTCAA AACCACCGCC GGGGAACAAA AGACCGGTTT GCTTACGGAA ACCGGCATTG TTGACCTGGC TAAAGCCAGC AATGGACAAC TGCCCAGCGA TATGCTAACG CTTATCGACC AGTATGAACA CTGTGCCCCA ATCCTGAATG GATTACTGGA TGCCCGGCCG GATTACGAAC TGGCGGAGGT AACACTGCTG GCTCCGCTGC CCAACCCGCG CTCTTTCCGG GATTATGTAG CCTTTGAACA GCACATGCTC AATGCCGGTA AAACGTTCGG TCATGCGGTA GCCCCGGTCT GGTACGAGAT GCCCATTTTC TATTTCACCA ACCACCAGGC CATTTCAGGC ACAGGTCAGG CTATTGCCCG GCCACCCTTG TGCCGAAAGC TGGATTATGA GCTGGAGATG GCCTGCATCA TCGGTAAACA AGGCGCAGAT ATTAAAGCCG AAGACGCCGA TGACTATATT TTTGGCTATA CCATTTTCAA CGACTGGTCG GCTCGCGACA TTCAGGGGAA AGAGATGGGT GTGCCGCTGG GACCGCATAA AGGCAAAGAT TTCGCCAATA CCATCGGGCC TTGTATCGTC ACCAAAGACG AACTGAACCG GTACCGAACC ATCAACGACC GCTTCGACCT TCGCATGACG TCCAAAATCA ACGGGCAACT TATCTGCGAC GGGAACTTCA AAACCATACA CTACACCTTC GGGCAGATGA TCGAACGGGC GTCGGAGAAT GGCGTGACGC TGTACCCCGG CGATATACTT GGTTCGGGCA CTGTCGGTTG GGGCAGCTTG ATCGAGACCA ACTTCACGGC TCACCGGCCG CTGGAACCCG GCGACGAAGT GGAATTCGAG ATTGAAGGCA TCGGTATTCT GAAAAACATG GTAATCTGA
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Protein sequence | MKLVTFKTTA GEQKTGLLTE TGIVDLAKAS NGQLPSDMLT LIDQYEHCAP ILNGLLDARP DYELAEVTLL APLPNPRSFR DYVAFEQHML NAGKTFGHAV APVWYEMPIF YFTNHQAISG TGQAIARPPL CRKLDYELEM ACIIGKQGAD IKAEDADDYI FGYTIFNDWS ARDIQGKEMG VPLGPHKGKD FANTIGPCIV TKDELNRYRT INDRFDLRMT SKINGQLICD GNFKTIHYTF GQMIERASEN GVTLYPGDIL GSGTVGWGSL IETNFTAHRP LEPGDEVEFE IEGIGILKNM VI
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