Gene Slin_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1543 
Symbol 
ID8725277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1860631 
End bp1861398 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content56% 
IMG OID 
Productcyclase family protein 
Protein accessionYP_003386391 
Protein GI284036461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.874935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.46134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAA TTGACCTTTC GGTGACGATC TCACCCGCTA TAAAAGAGCC GTTACCCTTT 
TCCATTGCCT ACGAGAACCA CAAGGAAGGG GCGCAGAATA TGGGACCGAA GCTGCTGGGT
GGCTTACAGG CCGACGATCT TTTTATGGAA GGAAATGCCC TGGCCGGTGA GGTCATCACG
CTGACGGGTC ATGCCGGTAC GCACGTCGAT GCGCCATGGC ATTACTTCCC GACAACGGCG
GGGAAACCTG CCCGCACCAT CGAACAGATG CCGCTGGACT GGTTTTACCA CGATGGTGTC
GTGCTCGACT TCACCGACAA ACCCGACGCC TATTGCTTCA CGGTTGACGA TGTAAAAGAG
AAATTGGCCA ATATAGGCTA CACGCTCAAA CCGTTCGATA TTGTCCTGAT CCGCTGCGAT
GCCGACAAGC GACTGCACCA GGACGATTAT GTTCGTATCC ATGTCGGAGC CTCGGCCGAA
GCGACTCACT GGCTCATCGA CCAGGGTATT CGGGTAATGG GTACCGATGG CTGGGGCTGG
GACCCACCGC TGTTTACTCA GATCGCCGAA TATCACCGCA ACCCGCGCGA AGGGGTTATC
TGGGCCGCGC ACTACGTCGG CCGGGAGAAA GAGTATTGCC AAATTGAAAA GCTCGCGAAT
CTGGACCAGT TGCCTCCATT TGGGTTCAAA GTGTCGTGCT TCCCTATAAA GATCGAAGGC
GGAAGCGGAG GCTGGACCCG CGCCGTGGCC TTCGTCGATG AACCGTAA
 
Protein sequence
MKLIDLSVTI SPAIKEPLPF SIAYENHKEG AQNMGPKLLG GLQADDLFME GNALAGEVIT 
LTGHAGTHVD APWHYFPTTA GKPARTIEQM PLDWFYHDGV VLDFTDKPDA YCFTVDDVKE
KLANIGYTLK PFDIVLIRCD ADKRLHQDDY VRIHVGASAE ATHWLIDQGI RVMGTDGWGW
DPPLFTQIAE YHRNPREGVI WAAHYVGREK EYCQIEKLAN LDQLPPFGFK VSCFPIKIEG
GSGGWTRAVA FVDEP