Gene Slin_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1542 
Symbol 
ID8725276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1859477 
End bp1860601 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content54% 
IMG OID 
Productmonooxygenase FAD-binding protein 
Protein accessionYP_003386390 
Protein GI284036460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0929471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.228138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC AAACGAAAAC CAAGCGCGTC CTGATTGTGG GCGGTGGTAT TGCCGGTCTA 
TCGCTCGCCA TTGGCCTGAG TCAGCGCGGT ATTGAGGCCG AGATTGTTGA ACTCAAAGAA
GAATGGACCG TTTATGGCGT GGGCATCATT ATCCAAAGCA ACGTAATCCG GGCCATGCAC
CAGTTGGGTA TCCTCGACAA ATTTCTGGAT CAGGCCTACC CTTTCGAGAA TTCAATCGTT
TACCTGCCCA ACGGTCATAA AATTGTACAT CCAAGTGCGC GGCTGGCTGG CCCCGAATAC
CCACCCAACT GCGGAATTGC CCGAATTGCG CTGCATAAAG TGCTGGTGTC GACCGTGCTG
GCGGCTGGTG TTCCCGTTCG GCTGGGGGTG ACGCTTGCTA GTTATACCGA AACCGAAACG
GGTGTGTTGG TCAGTTTTAC CGATGGAACA ACGGGTGAGT ACGATGTTGT CGTGGGGGCT
GATGGTACGT TTTCCAAAGT ACGTTCGCTG GTATTTCCCG ATGTCAAACC TCATTTCACC
GGTCAGGCCG TCTGGCGGTA TAACTTCAGG CGGCAGGTAG AAGATTTAAC GAACTATATC
GGTCCCAAAG GACTGGCGGC TGGTCTTTGT CCGCTTTCCG ATGAGCTGAT GTACATGTAC
GTTACCTCGT TTGAACCGGA TAGACCCCGC TACGAAGAAA ACGAACTGGC CGAACAGATG
CGCATTCGGC TGGACGGTTT CACGGGACCC GTGGCAGCGC TGAAAGAGCA AATCACCGAT
GGTGCAGGCG TGGTTTACCG TCCAATGCAG GTCGTGTTTA TCCCTGAGAA ATGGCACAAA
GGTCGGGTGA TTCTGATTGG CGATGCGGCC CACTCGACCA CGCCCCACAT GGGGCAGGGA
GCTGGTATTT CGGTAGAAGA CGCGTTGGTT CTGGCCGACG AACTAAGCAA AGACGCCCCG
CTGGAAGCCA AATTCGAGCA ATTCATGCGC CGTCGCTACG AGCGTTGCAA GGCCGTTTGC
GAGCGTTCCG AGCAAATCGG CAAGTGGGAA ATGACTGGTG TTGTCGATGG AGATCGGCAT
GCCCTGGTAG GCAGAACCCT TCAGGAACTG GCCCAGCCGA TTTAA
 
Protein sequence
MSTQTKTKRV LIVGGGIAGL SLAIGLSQRG IEAEIVELKE EWTVYGVGII IQSNVIRAMH 
QLGILDKFLD QAYPFENSIV YLPNGHKIVH PSARLAGPEY PPNCGIARIA LHKVLVSTVL
AAGVPVRLGV TLASYTETET GVLVSFTDGT TGEYDVVVGA DGTFSKVRSL VFPDVKPHFT
GQAVWRYNFR RQVEDLTNYI GPKGLAAGLC PLSDELMYMY VTSFEPDRPR YEENELAEQM
RIRLDGFTGP VAALKEQITD GAGVVYRPMQ VVFIPEKWHK GRVILIGDAA HSTTPHMGQG
AGISVEDALV LADELSKDAP LEAKFEQFMR RRYERCKAVC ERSEQIGKWE MTGVVDGDRH
ALVGRTLQEL AQPI