Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1542 |
Symbol | |
ID | 8725276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1859477 |
End bp | 1860601 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | monooxygenase FAD-binding protein |
Protein accession | YP_003386390 |
Protein GI | 284036460 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0929471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.228138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTACTC AAACGAAAAC CAAGCGCGTC CTGATTGTGG GCGGTGGTAT TGCCGGTCTA TCGCTCGCCA TTGGCCTGAG TCAGCGCGGT ATTGAGGCCG AGATTGTTGA ACTCAAAGAA GAATGGACCG TTTATGGCGT GGGCATCATT ATCCAAAGCA ACGTAATCCG GGCCATGCAC CAGTTGGGTA TCCTCGACAA ATTTCTGGAT CAGGCCTACC CTTTCGAGAA TTCAATCGTT TACCTGCCCA ACGGTCATAA AATTGTACAT CCAAGTGCGC GGCTGGCTGG CCCCGAATAC CCACCCAACT GCGGAATTGC CCGAATTGCG CTGCATAAAG TGCTGGTGTC GACCGTGCTG GCGGCTGGTG TTCCCGTTCG GCTGGGGGTG ACGCTTGCTA GTTATACCGA AACCGAAACG GGTGTGTTGG TCAGTTTTAC CGATGGAACA ACGGGTGAGT ACGATGTTGT CGTGGGGGCT GATGGTACGT TTTCCAAAGT ACGTTCGCTG GTATTTCCCG ATGTCAAACC TCATTTCACC GGTCAGGCCG TCTGGCGGTA TAACTTCAGG CGGCAGGTAG AAGATTTAAC GAACTATATC GGTCCCAAAG GACTGGCGGC TGGTCTTTGT CCGCTTTCCG ATGAGCTGAT GTACATGTAC GTTACCTCGT TTGAACCGGA TAGACCCCGC TACGAAGAAA ACGAACTGGC CGAACAGATG CGCATTCGGC TGGACGGTTT CACGGGACCC GTGGCAGCGC TGAAAGAGCA AATCACCGAT GGTGCAGGCG TGGTTTACCG TCCAATGCAG GTCGTGTTTA TCCCTGAGAA ATGGCACAAA GGTCGGGTGA TTCTGATTGG CGATGCGGCC CACTCGACCA CGCCCCACAT GGGGCAGGGA GCTGGTATTT CGGTAGAAGA CGCGTTGGTT CTGGCCGACG AACTAAGCAA AGACGCCCCG CTGGAAGCCA AATTCGAGCA ATTCATGCGC CGTCGCTACG AGCGTTGCAA GGCCGTTTGC GAGCGTTCCG AGCAAATCGG CAAGTGGGAA ATGACTGGTG TTGTCGATGG AGATCGGCAT GCCCTGGTAG GCAGAACCCT TCAGGAACTG GCCCAGCCGA TTTAA
|
Protein sequence | MSTQTKTKRV LIVGGGIAGL SLAIGLSQRG IEAEIVELKE EWTVYGVGII IQSNVIRAMH QLGILDKFLD QAYPFENSIV YLPNGHKIVH PSARLAGPEY PPNCGIARIA LHKVLVSTVL AAGVPVRLGV TLASYTETET GVLVSFTDGT TGEYDVVVGA DGTFSKVRSL VFPDVKPHFT GQAVWRYNFR RQVEDLTNYI GPKGLAAGLC PLSDELMYMY VTSFEPDRPR YEENELAEQM RIRLDGFTGP VAALKEQITD GAGVVYRPMQ VVFIPEKWHK GRVILIGDAA HSTTPHMGQG AGISVEDALV LADELSKDAP LEAKFEQFMR RRYERCKAVC ERSEQIGKWE MTGVVDGDRH ALVGRTLQEL AQPI
|
| |