Gene Slin_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1540 
Symbol 
ID8725274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1858289 
End bp1858885 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386388 
Protein GI284036458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.110674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.265917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TCAGATTTTT TATGGTAACG CCATCTGTTA AATCGTCCGG ACTGGGCTGG 
GGATTTTCTA CTGTGGATAT AATCGTGCAG GCCCGTCAGA AGCTACCCCG CAGTCGTGTC
GATGATGTTG CGGTTTTAGG TGGCCTGACC AAAAAGCAGA TGGCCCTTGT GCTGGGCGTT
ACGGAGCGGA ATCTCTACAA TCAGCACCAG GGAGAGTTGT CAGTTCCGCT TTCTGAACGA
CTGTTATTAT TGGAGAAATT GTTTCAGCAT GGCCTGGAGG TCTTTGACGG CCACCGCGAG
GGTTTTTATA CCTGGCTTCG TACCCCTCTT GCCGAGCTGG CTACGCCCGA AGTAGGTTTT
GCGGCCCCGT CATCAACCTA TATTCCCCGG CCAATAGCCG AGATGGGTAC CACACAGGGT
CCTGTCGATC TGGCATCGGC AGCGCAGGCA CGTCGGGTGC GACTGGCAAA CGAGAACCTG
TCCGCTCTGG AGTCTACGCC GTCCTATCCA ACGCCATTAT CGTTACTCGA CACCATAACC
GGATGCAAGC TGGTCGATAA TGTCTTTACC CGCATCGAAG CCGGGGTATT TAGTTAA
 
Protein sequence
MKNFRFFMVT PSVKSSGLGW GFSTVDIIVQ ARQKLPRSRV DDVAVLGGLT KKQMALVLGV 
TERNLYNQHQ GELSVPLSER LLLLEKLFQH GLEVFDGHRE GFYTWLRTPL AELATPEVGF
AAPSSTYIPR PIAEMGTTQG PVDLASAAQA RRVRLANENL SALESTPSYP TPLSLLDTIT
GCKLVDNVFT RIEAGVFS