Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1536 |
Symbol | |
ID | 8725270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1854598 |
End bp | 1855914 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | 3-carboxy-cis,cis-muconate cycloisomerase |
Protein accession | YP_003386384 |
Protein GI | 284036454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0157227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.182398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT ATTCCAGCCT GTTTTATAGT CCAGATATGC AGTCGTTACT GTCTGAAGAA ACAACGGTGG CGCATATGCT TCGGTTTGAA GCGGCATTGG CGACGGCTCA GGCAAATAAT GGCCTCATCC CAACGCCTTC AGCCGAACGG ATTGCGGCTT GCTGTACTGT TGAGTTGCTG GATTGGGAGC GGCTCAAAAA AGACATTGCC CTGAGTGGGA ATGCCGCGAT TCCGCTGGTC AAACAACTTA CCGAAGTTGT CAGAAAGCGG GATGAAGAAG CCGCTGGATT TGTGCATCTG GGTGCAACCA GCCAGGACGT GGTCGATACG GCAACCGTAT TGACCATCAA AAGTGTGCTC GATTGGCTGG ACGACAAACT CTCGGCACTG GCTAATAGGC TGATTGCCCT GACGCAGGCG CATCGCCAGA CCGTTATGAT CGGCCGGACG TTGTTGCAAC AGGCAAAACC CATCACCTTC GGCCTGAAAA CGGCCTTGTG GCTGGACGGT CTCGGCCGCA GTCAGCAACG GCTGGCAGCT TGTCGGCAAC GGGTGCTTGT GCTGCAACTG GCGGGGGCGG TGGGCAGCCG CAATGCGTCG ATTCCAGATG CAGTGCATCA GGAGACCGCG AATTTATTAG GGCTGGAGTC TTCCGTTTCC TGGCATACGC AGCGGGATAA CATAGCCGAA CTGGCCGCTG TGATGGGCAT TCTTTCGGGT AGTCTGGCTA AGATAGCGAA CGATGTTATG CTGTTGATGC AGACCGAGAT TGCCGAAGTG CTGGAAGGAA AAGCGGCTGG TAAAGGCAGC TCCAGTACGA TGCCGCACAA ACGCAACCCG GTCACCACAA CGGCCATTCT GGCCAACGCC AATCGGGTGC CGAATTTAGT AGCCACAATG CTGTCGGCCA TGCCGCAGGA ACACGAACGC TCCGCCGGGC GCTGGCATTC GGAGTGGGAC GTACTCACCG ACATCATGCA GCTTACAGCC GGGTCTGTTG AACGCTCCTT GGAGTTGCTT GATAATCTCG AAGTGGATTC GCAACGTATG CGACAAAACC TCGAACTGAC CAACGGCCTG ATCTACGCCG AAACCATTTC GCTGGCGCTG GCTCCCAAAC TGGGGAAAGC CACCGCCCAT GAACTGGTCG AAAAAGCGTG TGCGGTGGCT ATTGCGGAAC AGAAACACTT AAAAGACGTG CTTCGGGAAC AAGCCATTGA TGTAGCTGAT CTGGACAAGC TTTTCAAGCC GGAAAACTCG CTGGGGCAGG CGCTGGAGAT TATTGATTTT ATTCTGCACC GCTTTGTACA TTCATAG
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Protein sequence | MSLYSSLFYS PDMQSLLSEE TTVAHMLRFE AALATAQANN GLIPTPSAER IAACCTVELL DWERLKKDIA LSGNAAIPLV KQLTEVVRKR DEEAAGFVHL GATSQDVVDT ATVLTIKSVL DWLDDKLSAL ANRLIALTQA HRQTVMIGRT LLQQAKPITF GLKTALWLDG LGRSQQRLAA CRQRVLVLQL AGAVGSRNAS IPDAVHQETA NLLGLESSVS WHTQRDNIAE LAAVMGILSG SLAKIANDVM LLMQTEIAEV LEGKAAGKGS SSTMPHKRNP VTTTAILANA NRVPNLVATM LSAMPQEHER SAGRWHSEWD VLTDIMQLTA GSVERSLELL DNLEVDSQRM RQNLELTNGL IYAETISLAL APKLGKATAH ELVEKACAVA IAEQKHLKDV LREQAIDVAD LDKLFKPENS LGQALEIIDF ILHRFVHS
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