Gene Slin_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1530 
Symbol 
ID8725264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1847584 
End bp1848471 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative esterase 
Protein accessionYP_003386378 
Protein GI284036448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.547916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0514313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTAC CCAAAACAAG CCGTACCGTC AAGGTATTTG TGCTGGCTTG CCTATTGTCG 
TTTCCTTCGC TGGCAGCTCG CGTCGATACG CTCAATGTAC CCAGTGCCAG CATGAACCGA
ACACTGCGGG CGGGCGTCAT TTTACCGGAT CGGTACCGAA AAGCGAAACA ACCGTTTCCG
GTGCTCTATC TGCTCCACGG TGGTACAGGC AATTTCCGGG ATTGGCTCAC CAAAACCCCG
GACAAGACAC TATTGCATCG ACTAGCCGAC CAGTACAATA TTATCATCGT GACGCCCGAC
GGCGACCCTA CCAGTTACTA TTTCGACAGC CCGCTCGTAA AAAGCAGTCA GTTTGAAACC
TTTATTTCGA AAGAATTGAT CGACCAGATC GACAACACGT ATCGTACCGT TCGGGAGAAA
AAGGGACGCA TCATTGCGGG CCTTTCGATG GGTGGGCACG GGGCTATGTA CATTTCCAGC
CGACACCCGG AGTTGTACGC TGCCGCCGGA AGCATGAGCG GGGTGATGAA CATCAACACC
GCCACCTGGA AAGTCCCCGC CGATTTCGCC AAGTCACGCG CCGAGAATTT TGCCAAGTTG
CTTGGGCCTC CTAAAGACGG CGACGCTCCC TACCCCGGCT TCACGATGGT GACGTTGGCC
GACCAGCTCA AAGCGAATAA CCTGCCGCTG ATCTTTGACA TTGGCGTCGA TGATTTTCTG
ATTGAAGGCA ATCGGGAAAT CCACCGCCTG CTGGTGGCCA ACAAAACTCC GCACGACTAT
ACCGAGCGAC CCGGTGCCCA TACCTGGGAG TACTGGGAGA ACGCCCTACC CTATCAGATG
CTGTTTTTCA ACAAAATCCT GACCGCGAAC CAGGTTACCA TCCATTAA
 
Protein sequence
MQLPKTSRTV KVFVLACLLS FPSLAARVDT LNVPSASMNR TLRAGVILPD RYRKAKQPFP 
VLYLLHGGTG NFRDWLTKTP DKTLLHRLAD QYNIIIVTPD GDPTSYYFDS PLVKSSQFET
FISKELIDQI DNTYRTVREK KGRIIAGLSM GGHGAMYISS RHPELYAAAG SMSGVMNINT
ATWKVPADFA KSRAENFAKL LGPPKDGDAP YPGFTMVTLA DQLKANNLPL IFDIGVDDFL
IEGNREIHRL LVANKTPHDY TERPGAHTWE YWENALPYQM LFFNKILTAN QVTIH