Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1530 |
Symbol | |
ID | 8725264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1847584 |
End bp | 1848471 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | putative esterase |
Protein accession | YP_003386378 |
Protein GI | 284036448 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.547916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0514313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTAC CCAAAACAAG CCGTACCGTC AAGGTATTTG TGCTGGCTTG CCTATTGTCG TTTCCTTCGC TGGCAGCTCG CGTCGATACG CTCAATGTAC CCAGTGCCAG CATGAACCGA ACACTGCGGG CGGGCGTCAT TTTACCGGAT CGGTACCGAA AAGCGAAACA ACCGTTTCCG GTGCTCTATC TGCTCCACGG TGGTACAGGC AATTTCCGGG ATTGGCTCAC CAAAACCCCG GACAAGACAC TATTGCATCG ACTAGCCGAC CAGTACAATA TTATCATCGT GACGCCCGAC GGCGACCCTA CCAGTTACTA TTTCGACAGC CCGCTCGTAA AAAGCAGTCA GTTTGAAACC TTTATTTCGA AAGAATTGAT CGACCAGATC GACAACACGT ATCGTACCGT TCGGGAGAAA AAGGGACGCA TCATTGCGGG CCTTTCGATG GGTGGGCACG GGGCTATGTA CATTTCCAGC CGACACCCGG AGTTGTACGC TGCCGCCGGA AGCATGAGCG GGGTGATGAA CATCAACACC GCCACCTGGA AAGTCCCCGC CGATTTCGCC AAGTCACGCG CCGAGAATTT TGCCAAGTTG CTTGGGCCTC CTAAAGACGG CGACGCTCCC TACCCCGGCT TCACGATGGT GACGTTGGCC GACCAGCTCA AAGCGAATAA CCTGCCGCTG ATCTTTGACA TTGGCGTCGA TGATTTTCTG ATTGAAGGCA ATCGGGAAAT CCACCGCCTG CTGGTGGCCA ACAAAACTCC GCACGACTAT ACCGAGCGAC CCGGTGCCCA TACCTGGGAG TACTGGGAGA ACGCCCTACC CTATCAGATG CTGTTTTTCA ACAAAATCCT GACCGCGAAC CAGGTTACCA TCCATTAA
|
Protein sequence | MQLPKTSRTV KVFVLACLLS FPSLAARVDT LNVPSASMNR TLRAGVILPD RYRKAKQPFP VLYLLHGGTG NFRDWLTKTP DKTLLHRLAD QYNIIIVTPD GDPTSYYFDS PLVKSSQFET FISKELIDQI DNTYRTVREK KGRIIAGLSM GGHGAMYISS RHPELYAAAG SMSGVMNINT ATWKVPADFA KSRAENFAKL LGPPKDGDAP YPGFTMVTLA DQLKANNLPL IFDIGVDDFL IEGNREIHRL LVANKTPHDY TERPGAHTWE YWENALPYQM LFFNKILTAN QVTIH
|
| |