Gene Slin_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1529 
Symbol 
ID8725263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1845937 
End bp1847538 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content54% 
IMG OID 
ProductCarboxylesterase 
Protein accessionYP_003386377 
Protein GI284036447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.348412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0420034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCGG CCACCCGGCC TGCTGTCCGG TACATTACCC CTAACCACAT GACAACAAAA 
TCATTAGTAC GTATCACTTC CTGCGGCATT CTGTTTGGGC TCCTATCGTT CACGGGTATC
AGCCGCGAGT TTGACGCCGT TACCGTTACA GGTGGCCAGA TTTCCGGTAC TGTGAATAAA
ACCGGCGACG TACACATTTT TAAAGGTATT CCCTTTGCCG CTCCACCCGT TGGCGACCGT
CGCTGGAAAG CGCCACAACC CGTTATTCCG TGGTCGGGCG TTCGCAAATG TGATGCCTTT
GGACCGAGTC CGGTTCAGGG TAGCCCGAAT CCATTTGGTC CCTGGAGCGC CGAGTTTCTG
ATTCCAAAAG AACCCATTAG TGAGGACTGT CTCTATCTAA ATGTCTGGAC AGCGGCAAAA
TCAGCTGCCG AAAAAAGACC CGTTCTGGTA TGGATTTACG GCGGTGGCTT CAACAGTGGT
GGTGCCGGAG TTCCTATTTA CGACGGTGAA GCAACAGCTA AAAAAGGGGT AATCTTCGTC
AGCATGAACT ACCGCGTGGG TCCATTCGGC TTCTTCTCCC ACCCGGAGCT AACCAAAGAA
TCGGGGCGAA ATGCCTCCGG AAATTATGGT CTGATGGATC AGATCGCGGC ATTGCAGTGG
GTAAAGCAGA ACATTGCCCG GTTTGGTGGC GACCCTGCCA ATGTAACCAT CGCTGGTCAG
TCGGCCGGGT CTATGAGTGT GAACGCACTG GTCGCGTCTC CGTTAGCAAA AAATCTCTTT
ACGAAGGCGA TTGCCGAGAG TGGGGCTAAC TTTTCTCGTC CAGCCGCAAC GCTTGGCCAG
GCGGAGGAGG CCGGTGTGAA GATGGCCCAG TCGATGGGAG CCTCCTCGTT GGCGGACTTA
CGTGCTTTAC CGGCCGACGA AATCCTCAAA AAAGGACAGG GCCGCGGGCT GGTTATCGAC
GGGTACGTAC TACCGCAGCC CATTGCCGCT ATTTTTGCCG CCGGGAAACA GAACGACGTT
CGCTTGCTGA CTGGCTGGAA TGAGGACGAA GGAATGGTAT TTGGCCCCGC CAAAAAGGCA
GATGAATACC GGAAGCAGAT TGATGAGCAG TACGGAGCAA AGGCCGAGAC CTTCCTCCGG
TATTACCCGG CCGGGACCGA TGCCGAAGCC GAATCCTCTC AGGTGAAGAT TTCAAGAGAT
ATGGTCTTTG GCGCCCAGAA CTACCGATGG GCAACCATTC AAAGCCAGAA AGGAAAAACG
GCCTATGTGT ATCGTTTCGC CCGAAAAGTG CCCGCTACAG GTGAGTACGC CCGCTACGGT
GCATTCCATA CGGGTGAACT GGCCTATGCC TATGACAACC TAAGGTTCAT TGACCATACC
CTCCGTCCGC TGGAGCCAGC CGATACGCGA CTGGCCAACG AGATGTCTGC TTATTGGGTG
AATTTTATTA AAACCGGCAA TCCAAACGGG AAAGGCCTTT CTAACTGGCC TGTTTATTCG
ACCACGAACA AGCAGATTAT GGTCTTCGAT ACGAAGACAG GCGTCAGGCA ACTACCCGAT
GGCCTAGCGC TGGATTTCCT GCTGACGACT ATGAGTAAAT GA
 
Protein sequence
MAPATRPAVR YITPNHMTTK SLVRITSCGI LFGLLSFTGI SREFDAVTVT GGQISGTVNK 
TGDVHIFKGI PFAAPPVGDR RWKAPQPVIP WSGVRKCDAF GPSPVQGSPN PFGPWSAEFL
IPKEPISEDC LYLNVWTAAK SAAEKRPVLV WIYGGGFNSG GAGVPIYDGE ATAKKGVIFV
SMNYRVGPFG FFSHPELTKE SGRNASGNYG LMDQIAALQW VKQNIARFGG DPANVTIAGQ
SAGSMSVNAL VASPLAKNLF TKAIAESGAN FSRPAATLGQ AEEAGVKMAQ SMGASSLADL
RALPADEILK KGQGRGLVID GYVLPQPIAA IFAAGKQNDV RLLTGWNEDE GMVFGPAKKA
DEYRKQIDEQ YGAKAETFLR YYPAGTDAEA ESSQVKISRD MVFGAQNYRW ATIQSQKGKT
AYVYRFARKV PATGEYARYG AFHTGELAYA YDNLRFIDHT LRPLEPADTR LANEMSAYWV
NFIKTGNPNG KGLSNWPVYS TTNKQIMVFD TKTGVRQLPD GLALDFLLTT MSK