Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1529 |
Symbol | |
ID | 8725263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1845937 |
End bp | 1847538 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Carboxylesterase |
Protein accession | YP_003386377 |
Protein GI | 284036447 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.348412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0420034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCCGG CCACCCGGCC TGCTGTCCGG TACATTACCC CTAACCACAT GACAACAAAA TCATTAGTAC GTATCACTTC CTGCGGCATT CTGTTTGGGC TCCTATCGTT CACGGGTATC AGCCGCGAGT TTGACGCCGT TACCGTTACA GGTGGCCAGA TTTCCGGTAC TGTGAATAAA ACCGGCGACG TACACATTTT TAAAGGTATT CCCTTTGCCG CTCCACCCGT TGGCGACCGT CGCTGGAAAG CGCCACAACC CGTTATTCCG TGGTCGGGCG TTCGCAAATG TGATGCCTTT GGACCGAGTC CGGTTCAGGG TAGCCCGAAT CCATTTGGTC CCTGGAGCGC CGAGTTTCTG ATTCCAAAAG AACCCATTAG TGAGGACTGT CTCTATCTAA ATGTCTGGAC AGCGGCAAAA TCAGCTGCCG AAAAAAGACC CGTTCTGGTA TGGATTTACG GCGGTGGCTT CAACAGTGGT GGTGCCGGAG TTCCTATTTA CGACGGTGAA GCAACAGCTA AAAAAGGGGT AATCTTCGTC AGCATGAACT ACCGCGTGGG TCCATTCGGC TTCTTCTCCC ACCCGGAGCT AACCAAAGAA TCGGGGCGAA ATGCCTCCGG AAATTATGGT CTGATGGATC AGATCGCGGC ATTGCAGTGG GTAAAGCAGA ACATTGCCCG GTTTGGTGGC GACCCTGCCA ATGTAACCAT CGCTGGTCAG TCGGCCGGGT CTATGAGTGT GAACGCACTG GTCGCGTCTC CGTTAGCAAA AAATCTCTTT ACGAAGGCGA TTGCCGAGAG TGGGGCTAAC TTTTCTCGTC CAGCCGCAAC GCTTGGCCAG GCGGAGGAGG CCGGTGTGAA GATGGCCCAG TCGATGGGAG CCTCCTCGTT GGCGGACTTA CGTGCTTTAC CGGCCGACGA AATCCTCAAA AAAGGACAGG GCCGCGGGCT GGTTATCGAC GGGTACGTAC TACCGCAGCC CATTGCCGCT ATTTTTGCCG CCGGGAAACA GAACGACGTT CGCTTGCTGA CTGGCTGGAA TGAGGACGAA GGAATGGTAT TTGGCCCCGC CAAAAAGGCA GATGAATACC GGAAGCAGAT TGATGAGCAG TACGGAGCAA AGGCCGAGAC CTTCCTCCGG TATTACCCGG CCGGGACCGA TGCCGAAGCC GAATCCTCTC AGGTGAAGAT TTCAAGAGAT ATGGTCTTTG GCGCCCAGAA CTACCGATGG GCAACCATTC AAAGCCAGAA AGGAAAAACG GCCTATGTGT ATCGTTTCGC CCGAAAAGTG CCCGCTACAG GTGAGTACGC CCGCTACGGT GCATTCCATA CGGGTGAACT GGCCTATGCC TATGACAACC TAAGGTTCAT TGACCATACC CTCCGTCCGC TGGAGCCAGC CGATACGCGA CTGGCCAACG AGATGTCTGC TTATTGGGTG AATTTTATTA AAACCGGCAA TCCAAACGGG AAAGGCCTTT CTAACTGGCC TGTTTATTCG ACCACGAACA AGCAGATTAT GGTCTTCGAT ACGAAGACAG GCGTCAGGCA ACTACCCGAT GGCCTAGCGC TGGATTTCCT GCTGACGACT ATGAGTAAAT GA
|
Protein sequence | MAPATRPAVR YITPNHMTTK SLVRITSCGI LFGLLSFTGI SREFDAVTVT GGQISGTVNK TGDVHIFKGI PFAAPPVGDR RWKAPQPVIP WSGVRKCDAF GPSPVQGSPN PFGPWSAEFL IPKEPISEDC LYLNVWTAAK SAAEKRPVLV WIYGGGFNSG GAGVPIYDGE ATAKKGVIFV SMNYRVGPFG FFSHPELTKE SGRNASGNYG LMDQIAALQW VKQNIARFGG DPANVTIAGQ SAGSMSVNAL VASPLAKNLF TKAIAESGAN FSRPAATLGQ AEEAGVKMAQ SMGASSLADL RALPADEILK KGQGRGLVID GYVLPQPIAA IFAAGKQNDV RLLTGWNEDE GMVFGPAKKA DEYRKQIDEQ YGAKAETFLR YYPAGTDAEA ESSQVKISRD MVFGAQNYRW ATIQSQKGKT AYVYRFARKV PATGEYARYG AFHTGELAYA YDNLRFIDHT LRPLEPADTR LANEMSAYWV NFIKTGNPNG KGLSNWPVYS TTNKQIMVFD TKTGVRQLPD GLALDFLLTT MSK
|
| |