Gene Slin_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1527 
Symbol 
ID8725261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1841624 
End bp1842559 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content48% 
IMG OID 
Productphosphoesterase PA-phosphatase related protein 
Protein accessionYP_003386375 
Protein GI284036445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.266998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAC ACCCGGAAAT TATCCGTCCA ACCCTTATAA GCCGAATTCT GCCGCTCAGT 
CTGATCTCAC TTGGGTATCT GTTACTCTCT TATGAGCTTG TTGGCTTCAA GTCCGATCAA
CTCGTGCTCA TCGGGCTGGT GAATGGCCTG TATTATGCCT CCGAACAAAG CCGTAAGTTC
ATCATCGGCT TTTCGATCTT CATTGTGTAC TGGATTGTTT TCGATTACAT GAAAGCGTTT
CCGAATTACG CGTATAATAC GGTACACATT GAATCCCTTT ATTTGCTGGA AAAAAAACTG
TTCGGCATTC CGTTCGGTAC TGTGATACTA ACGCCTAACG AATACTGGCT GGCGCACCGA
ACGGATTCGC TCGCTATCGT AACCGGGCTT TTTTACCTAA GCTGGGTGCC AATTCCACTG
CTGTTTGCTA CCTATCTTTT CATTAAAGAC CGGCCCCAGT TTTATCCTCT CGCCCTGACC
TTCGTGCTGG TCAATCTGAT CGGGTTTGTC ATTTACTACG TTTACCCGGC GGTTCCGCCC
TGGTATGTGC AGCTGTATGG ATTTACGTTT CACCCGCACA CGCCCGGCAA CACGGCTGGT
CTGGCTCGCT TCGACGAGCT TCTTGGCGTT TCGGTTTTCA GCTCTATTTA CGCCAAAAGT
TCGAATGTGT TTGCGGCCAT GCCGTCTCTC CACTCATCTT ACCCGGTCAT TGTGCTCTAT
TACGGGATAA AGAACCGAAT GGGCGCATTG AACGGGTTCT TTGCCCTGAT AATGGTAGGC
ATCTGGTTCT CCGCTATCTA CACCAGTCAT CATTATGTGC TGGATGTACT GGCCGGAATC
ACTTGCGCCG TAATAGGTAT TATACTCTTC AATCAGTTAA AAAAGACACG CTGGTTAAAT
GCCTTGATCC AGCAACTGGT GAGGTTAACG GCGTAA
 
Protein sequence
MHQHPEIIRP TLISRILPLS LISLGYLLLS YELVGFKSDQ LVLIGLVNGL YYASEQSRKF 
IIGFSIFIVY WIVFDYMKAF PNYAYNTVHI ESLYLLEKKL FGIPFGTVIL TPNEYWLAHR
TDSLAIVTGL FYLSWVPIPL LFATYLFIKD RPQFYPLALT FVLVNLIGFV IYYVYPAVPP
WYVQLYGFTF HPHTPGNTAG LARFDELLGV SVFSSIYAKS SNVFAAMPSL HSSYPVIVLY
YGIKNRMGAL NGFFALIMVG IWFSAIYTSH HYVLDVLAGI TCAVIGIILF NQLKKTRWLN
ALIQQLVRLT A