Gene Slin_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1519 
Symbol 
ID8725253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1833199 
End bp1834125 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content52% 
IMG OID 
Productiron-sulfur cluster binding protein 
Protein accessionYP_003386368 
Protein GI284036438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.120266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.625515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCAC CTGCTCATCA CTATTCGAAA CTGATTAAAG CAAAGGCCGT TGCCCTGGGC 
TTTGATTTTT GTGGTGTGGC CAAAGCCGAT TTTCTGGAAG AGGAAGCTCC CCGCCTGGAA
ACCTGGCTCA AGAACGGGAT GCACGGCCAA ATGAATTACA TGGCCAATCA TTTCGATAAA
CGACTCGATC CGCGTTTGCT GGTCGATGAC GCCAAATCGG TGATAACGGT GCTGCTCAAT
TATTACCCCG AACAAAAATT GCCCGAAGGT GATGACGACC TTAAGCTATC TAAATACGCC
TATGGAACCG ATTATCACTT CGTTATCAAA GATAAACTGA AGCATTTACT GACGTATATC
CACGACGAAA TCGGCGACGT GGGTGGCCGG GCCTTTGTCG ATTCAGCACC GGTTATGGAC
AAAGCCTGGG CCAAACGCGC TGGCTTGGGC TGGGTAGGCA AACACACGAA TCTGATCAAT
CGGGAGATCG GCTCGTTCTT CTTTATCGGC GAACTCATCC TCGACCTTGA ACTGGAGCCC
GATGGCCCCA TCACCGACTA TTGCGGCACC TGCACCCGCT GCATAGACGC CTGCCCGACG
GACGCCATTG TTGGCCCGTA CGTTGTCGAC GGCAGCAAGT GCATTTCGTA CTTCACGATT
GAGTTAAAAG AGGCCATTCC CACCGAAGTG AAAGGGCAGT TTAACAACTG GATTTTCGGA
TGCGATATTT GTCAGGACGT TTGCCCCTGG AACCGCTTCG CCCGACCGCA TCAGACCCCC
GCCTTCGAGC CCCATCCCGA TCTGGCCTCG TTTACGAAGA CGGATTGGGA AGAAATTACG
GATGATGTTT TCCGGGAGAT TTTCCGGCGG TCGGCCGTGA AACGAACCAA GCTGGAAGGC
CTCAAACGGA ATATTGGTTT CTTGTAA
 
Protein sequence
MHAPAHHYSK LIKAKAVALG FDFCGVAKAD FLEEEAPRLE TWLKNGMHGQ MNYMANHFDK 
RLDPRLLVDD AKSVITVLLN YYPEQKLPEG DDDLKLSKYA YGTDYHFVIK DKLKHLLTYI
HDEIGDVGGR AFVDSAPVMD KAWAKRAGLG WVGKHTNLIN REIGSFFFIG ELILDLELEP
DGPITDYCGT CTRCIDACPT DAIVGPYVVD GSKCISYFTI ELKEAIPTEV KGQFNNWIFG
CDICQDVCPW NRFARPHQTP AFEPHPDLAS FTKTDWEEIT DDVFREIFRR SAVKRTKLEG
LKRNIGFL