Gene Slin_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1515 
Symbol 
ID8725249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1829384 
End bp1830793 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386364 
Protein GI284036434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0725112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA TTCTTTTTAG TCTTTCCCTG AGTATGCTGG CTGGTATGGC CTATGGACAG 
CACCAGCACC ACGAGGGTAT GGATATGTCG AAACACGAGG GGATGAGCAA GGATAGCGCT
ATGGGCGATA TGAAAATGCT CAATCACGGG CTCACGATGG ATGCATCCAT GCCCGGTATG
ACGCATTCAC TCTCGCGGAA CCTGCCCATG AACCGGAACG GTTCGGGTAC GTCCTGGCAC
CCCGATAATA CGCCTATGTA TGCCTACATG AGTCAGCCAA CGCCCAAAGG CTGGAGTTAC
ATGCTGCATT ATGCCATCTA CCTGCGCTAT ACCGGCCAAA ACAGTAATAA CGCCGACCGA
CGCGGCAACG GCCAGCAGTT CGGTGCACCA AACTGGTTTA TGGGTATGGC ACAGCGTAAA
GTTGGCCAGC GCGGCTTGTT TCAAGTGCGA GCCATGATCT CCCTCGATCC GCTGACGGTG
GGGAATGGTG GGTACCCGTT GCTGTTCCAA ACTGGTGAAA CCTACAAGGG CCAACCGTTG
ATTGACAAAC AGCACCCACA CGACCTCATT TCGGAACTTT CGGTGAGTTA CAGCCATGCA
TTCAGCAAAG ACGTTGACCT GTTCGGCTAC GTTGGCTACC CCGGCGAACC GGCATTGGGG
CCTCCCGCCT TTATGCATCG GATTTCGTCG TTCAACAATC CCGATGCGCC CTTGAGCCAC
CACTGGCAGG ATGCAACTCA TATTCTGTTT GGCGTTGCTA CGGCTGGCGT TCGGTATAAA
TGGGCGAAGC TGGAAGCTTC GACGTTCAAA GGCCGTGAGC CTGACGAGAA CCGGTATAAC
TTCGACGCCC CCAAATTTGA CAGCTATTCG TACCGGCTAT CGGTTAATCC GTCGCCCTCG
CTAGCGCTCC AGTTCTCGCA GGGATTTCTG CACAGTCCGG AAGAAGCACA TCCCGGAGAA
AACACGACCC GAACAACGGC ATCTATTTTG CATAGCAAAG GGCTGGGGCC AGCGAGCTAC
GTAACCTCGG CCTTTGTGTG GGGGCGTAAC AGCCACGATG GTTCCGGTGA AAACTCGTAT
CTGGCCGAAA GCAGCCTACA AATGAATAAA GCCGCTTTTT ATGGCCGGTA TGAGAATGTC
AGTAAATCGG GCGAAGAGTT GAACCTGTTT GGCACTACGT TACCGGCCGA AGTTGTCGCT
AATCGGACTT ATGTGATCAA TAACCTGACA CTCGGTATGA ATTACCGAAT TGCTCAGCAG
CTCCGCTCCG ACCTGGTGTT AGGGGCGCAG ATCACGACAA GTATGCCCGA TAAAGCATTG
CAATCAGTGT ACGGTAAGAT GCCCATTTCG GGGCAAATTT ACCTTCGCCT GTCGCCAAGC
CTCATGACCA TACATAGCAT GCATCATTGA
 
Protein sequence
MNRILFSLSL SMLAGMAYGQ HQHHEGMDMS KHEGMSKDSA MGDMKMLNHG LTMDASMPGM 
THSLSRNLPM NRNGSGTSWH PDNTPMYAYM SQPTPKGWSY MLHYAIYLRY TGQNSNNADR
RGNGQQFGAP NWFMGMAQRK VGQRGLFQVR AMISLDPLTV GNGGYPLLFQ TGETYKGQPL
IDKQHPHDLI SELSVSYSHA FSKDVDLFGY VGYPGEPALG PPAFMHRISS FNNPDAPLSH
HWQDATHILF GVATAGVRYK WAKLEASTFK GREPDENRYN FDAPKFDSYS YRLSVNPSPS
LALQFSQGFL HSPEEAHPGE NTTRTTASIL HSKGLGPASY VTSAFVWGRN SHDGSGENSY
LAESSLQMNK AAFYGRYENV SKSGEELNLF GTTLPAEVVA NRTYVINNLT LGMNYRIAQQ
LRSDLVLGAQ ITTSMPDKAL QSVYGKMPIS GQIYLRLSPS LMTIHSMHH