Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1515 |
Symbol | |
ID | 8725249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1829384 |
End bp | 1830793 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386364 |
Protein GI | 284036434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0725112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAA TTCTTTTTAG TCTTTCCCTG AGTATGCTGG CTGGTATGGC CTATGGACAG CACCAGCACC ACGAGGGTAT GGATATGTCG AAACACGAGG GGATGAGCAA GGATAGCGCT ATGGGCGATA TGAAAATGCT CAATCACGGG CTCACGATGG ATGCATCCAT GCCCGGTATG ACGCATTCAC TCTCGCGGAA CCTGCCCATG AACCGGAACG GTTCGGGTAC GTCCTGGCAC CCCGATAATA CGCCTATGTA TGCCTACATG AGTCAGCCAA CGCCCAAAGG CTGGAGTTAC ATGCTGCATT ATGCCATCTA CCTGCGCTAT ACCGGCCAAA ACAGTAATAA CGCCGACCGA CGCGGCAACG GCCAGCAGTT CGGTGCACCA AACTGGTTTA TGGGTATGGC ACAGCGTAAA GTTGGCCAGC GCGGCTTGTT TCAAGTGCGA GCCATGATCT CCCTCGATCC GCTGACGGTG GGGAATGGTG GGTACCCGTT GCTGTTCCAA ACTGGTGAAA CCTACAAGGG CCAACCGTTG ATTGACAAAC AGCACCCACA CGACCTCATT TCGGAACTTT CGGTGAGTTA CAGCCATGCA TTCAGCAAAG ACGTTGACCT GTTCGGCTAC GTTGGCTACC CCGGCGAACC GGCATTGGGG CCTCCCGCCT TTATGCATCG GATTTCGTCG TTCAACAATC CCGATGCGCC CTTGAGCCAC CACTGGCAGG ATGCAACTCA TATTCTGTTT GGCGTTGCTA CGGCTGGCGT TCGGTATAAA TGGGCGAAGC TGGAAGCTTC GACGTTCAAA GGCCGTGAGC CTGACGAGAA CCGGTATAAC TTCGACGCCC CCAAATTTGA CAGCTATTCG TACCGGCTAT CGGTTAATCC GTCGCCCTCG CTAGCGCTCC AGTTCTCGCA GGGATTTCTG CACAGTCCGG AAGAAGCACA TCCCGGAGAA AACACGACCC GAACAACGGC ATCTATTTTG CATAGCAAAG GGCTGGGGCC AGCGAGCTAC GTAACCTCGG CCTTTGTGTG GGGGCGTAAC AGCCACGATG GTTCCGGTGA AAACTCGTAT CTGGCCGAAA GCAGCCTACA AATGAATAAA GCCGCTTTTT ATGGCCGGTA TGAGAATGTC AGTAAATCGG GCGAAGAGTT GAACCTGTTT GGCACTACGT TACCGGCCGA AGTTGTCGCT AATCGGACTT ATGTGATCAA TAACCTGACA CTCGGTATGA ATTACCGAAT TGCTCAGCAG CTCCGCTCCG ACCTGGTGTT AGGGGCGCAG ATCACGACAA GTATGCCCGA TAAAGCATTG CAATCAGTGT ACGGTAAGAT GCCCATTTCG GGGCAAATTT ACCTTCGCCT GTCGCCAAGC CTCATGACCA TACATAGCAT GCATCATTGA
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Protein sequence | MNRILFSLSL SMLAGMAYGQ HQHHEGMDMS KHEGMSKDSA MGDMKMLNHG LTMDASMPGM THSLSRNLPM NRNGSGTSWH PDNTPMYAYM SQPTPKGWSY MLHYAIYLRY TGQNSNNADR RGNGQQFGAP NWFMGMAQRK VGQRGLFQVR AMISLDPLTV GNGGYPLLFQ TGETYKGQPL IDKQHPHDLI SELSVSYSHA FSKDVDLFGY VGYPGEPALG PPAFMHRISS FNNPDAPLSH HWQDATHILF GVATAGVRYK WAKLEASTFK GREPDENRYN FDAPKFDSYS YRLSVNPSPS LALQFSQGFL HSPEEAHPGE NTTRTTASIL HSKGLGPASY VTSAFVWGRN SHDGSGENSY LAESSLQMNK AAFYGRYENV SKSGEELNLF GTTLPAEVVA NRTYVINNLT LGMNYRIAQQ LRSDLVLGAQ ITTSMPDKAL QSVYGKMPIS GQIYLRLSPS LMTIHSMHH
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