Gene Slin_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1508 
Symbol 
ID8725242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1822648 
End bp1823532 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content56% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003386357 
Protein GI284036427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.432836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAA GCGGGATGCT GCGCGACGAT GCGCTAAAAG GGAAAACCAT TATTGTTACC 
GGGGGTGGTA CAGGCCTTGG TAAATCCATC AGCCGGTATC TGCTCCAGCT GGGTGCCAAT
GTAACCATTT GCAGTCGGCG TCAAAACGTC ATCGACGAAA CGGCGAAGGA GTTGATGGAC
GAGACCGGCG GGCAGGTGCT GGCCGTAGCC TGTGACGTCC GGAATACTGC CGAGATCGAG
AACGTGATCG CCCGGACAAT CGAAACGTTT GGCCGCATCG ACGGGTTGCT CAATAACTCG
GCCGGTAACT TTATCAGCCC AACCGAGCGC TTGTCGTACA AGGCGTTCGA TACCATTGTC
GACATCGTGC TGCGCGGCAC CTACTACTTC ACGCTGGCTG TCGGTAAATA CTGGATCGAG
AACAAGATTC CCGGTACGGT ACTGAATATA TCGACAACCT ACGCCACTAC GGGTTCGGGC
TATGTGGTAC CGTCGGCCGT GGCCAAGGGC GGAGCGCTTA TTATGACCAA ATCGCTGGCA
GCCGAGTGGG GCAAATACGG TATCCGTCTG AACGCCATTG CACCCGGTCC GTTCCCTACC
AAAGGCGCAT GGGACCGGCT CTTTCCCGAA CCACTGGCCA GCATGATGGA CCCTACCAGC
CGCATTCCCC TGCACCGCGT TGGCGAACAT GGCGAACTGG CCAATCTGGC TGCGTTTCTG
CTGTCGGATT TTTCGAGCTA TATCACTGGC GAAAGCATTA CCATCGACGG GGGCGAAGTG
CTCATGGCGG GCGAATTCAG CCATCTGGAA AACGTTACCA CCGATCAGTG GGATATGATC
GAGCAAACCA TCAAACAGGC TAACCGGGCC AGTAAAAAAG AGTGA
 
Protein sequence
MNVSGMLRDD ALKGKTIIVT GGGTGLGKSI SRYLLQLGAN VTICSRRQNV IDETAKELMD 
ETGGQVLAVA CDVRNTAEIE NVIARTIETF GRIDGLLNNS AGNFISPTER LSYKAFDTIV
DIVLRGTYYF TLAVGKYWIE NKIPGTVLNI STTYATTGSG YVVPSAVAKG GALIMTKSLA
AEWGKYGIRL NAIAPGPFPT KGAWDRLFPE PLASMMDPTS RIPLHRVGEH GELANLAAFL
LSDFSSYITG ESITIDGGEV LMAGEFSHLE NVTTDQWDMI EQTIKQANRA SKKE