Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1508 |
Symbol | |
ID | 8725242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1822648 |
End bp | 1823532 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003386357 |
Protein GI | 284036427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.432836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTAA GCGGGATGCT GCGCGACGAT GCGCTAAAAG GGAAAACCAT TATTGTTACC GGGGGTGGTA CAGGCCTTGG TAAATCCATC AGCCGGTATC TGCTCCAGCT GGGTGCCAAT GTAACCATTT GCAGTCGGCG TCAAAACGTC ATCGACGAAA CGGCGAAGGA GTTGATGGAC GAGACCGGCG GGCAGGTGCT GGCCGTAGCC TGTGACGTCC GGAATACTGC CGAGATCGAG AACGTGATCG CCCGGACAAT CGAAACGTTT GGCCGCATCG ACGGGTTGCT CAATAACTCG GCCGGTAACT TTATCAGCCC AACCGAGCGC TTGTCGTACA AGGCGTTCGA TACCATTGTC GACATCGTGC TGCGCGGCAC CTACTACTTC ACGCTGGCTG TCGGTAAATA CTGGATCGAG AACAAGATTC CCGGTACGGT ACTGAATATA TCGACAACCT ACGCCACTAC GGGTTCGGGC TATGTGGTAC CGTCGGCCGT GGCCAAGGGC GGAGCGCTTA TTATGACCAA ATCGCTGGCA GCCGAGTGGG GCAAATACGG TATCCGTCTG AACGCCATTG CACCCGGTCC GTTCCCTACC AAAGGCGCAT GGGACCGGCT CTTTCCCGAA CCACTGGCCA GCATGATGGA CCCTACCAGC CGCATTCCCC TGCACCGCGT TGGCGAACAT GGCGAACTGG CCAATCTGGC TGCGTTTCTG CTGTCGGATT TTTCGAGCTA TATCACTGGC GAAAGCATTA CCATCGACGG GGGCGAAGTG CTCATGGCGG GCGAATTCAG CCATCTGGAA AACGTTACCA CCGATCAGTG GGATATGATC GAGCAAACCA TCAAACAGGC TAACCGGGCC AGTAAAAAAG AGTGA
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Protein sequence | MNVSGMLRDD ALKGKTIIVT GGGTGLGKSI SRYLLQLGAN VTICSRRQNV IDETAKELMD ETGGQVLAVA CDVRNTAEIE NVIARTIETF GRIDGLLNNS AGNFISPTER LSYKAFDTIV DIVLRGTYYF TLAVGKYWIE NKIPGTVLNI STTYATTGSG YVVPSAVAKG GALIMTKSLA AEWGKYGIRL NAIAPGPFPT KGAWDRLFPE PLASMMDPTS RIPLHRVGEH GELANLAAFL LSDFSSYITG ESITIDGGEV LMAGEFSHLE NVTTDQWDMI EQTIKQANRA SKKE
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