Gene Slin_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1506 
Symbol 
ID8725240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1820317 
End bp1821438 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content58% 
IMG OID 
ProductCystathionine gamma-synthase 
Protein accessionYP_003386355 
Protein GI284036425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.39212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTCG ATACCCTCGC CCTCCGCGCC ACACATCAGT CCGACCCGGA AACCGGAGCC 
GTAGCTCCGC CTATTCATCT CTCCACCACG TTTGCCCGCA ACGAAGCCAA TGAACTGGTG
GGAGACTATA CTTACACCCG CCCAAACAAC CCCACCCGCG AAGCGCTGGA AAAAGCGATT
GCGCTACTCG AAGGCGGAGC AGTAGGGATG GCGTTTGGCT CCGGTCAGGC CGCTACCATG
ACGCTTTTTC AGGCACTTCG CCCTGGCGAC CATGTGCTTC TGTCGACCGA TGCCTACTAC
GGCACGCCCG CCCTGCTCGA ACAGGTTTTT CATCCCTGGG GGCTGACCTA CACCCGCGTC
GACATGAGCG ACCTCGATGC CGTCGAGTCA TCCATCCACG AGAATACCCG CATTGTGTGG
TGCGAAACGC CTTCCAACCC AATGCTGACC ATAACGGATT TGCTGACGGT AAGTCGGCTG
GCGCACGAAG CCGGTGCCCT TTGCGTATGC GACAACACCT GGGCAACGCC GGTGCTCCAA
CACCCCCTCG ACCTGAATTG CGATATTGTG ATGCACTCAA CCACCAAGTA TTTCAGCGGT
CATTCCGATG TACTGGGCGG GGCGCTGGTC TTTAAACGCA ATGACGAATT TGCGCAGCGG
GTGCGGCTAT TACAGGGACT ATCGGGGGCG GTACCCTCAC CGTTCGACTG CTGGCTGGTG
AGCCGGGGGC TTAAAACCCT GGGCGTTCGG GTGAGGGCAC AAAGCCTGAC GGCTCAGGCC
GTAGCCGAAT TTCTGGATGG GCACCCGGCC GTAGAGAAAG TTCATTACCC AGGCTTACCC
AATCATCCGG ACCGGGCGCT GATTCAGCAG CAGATGAACG GACCGGGTGC CATGCTGTCT
GTTCAGGTGA AGGGCGGGGC CGATGAAGCC ATTCGGTTTA TTGGCAAACT GAAACTGTTC
ACCCGCGCTA CCAGTCTGGG CGGTGTCGAG AGTTTAATTG AACACCGGGC GAGTGTAGAA
GGCCCTACCT CCGCCACGCC AAAAAATCTG CTACGTCTCT CTATAGGTCT CGAACATTCC
GAAGACTTGA TCAACGATCT GGCGCAGGCG TTGTCGTTAT AA
 
Protein sequence
MHFDTLALRA THQSDPETGA VAPPIHLSTT FARNEANELV GDYTYTRPNN PTREALEKAI 
ALLEGGAVGM AFGSGQAATM TLFQALRPGD HVLLSTDAYY GTPALLEQVF HPWGLTYTRV
DMSDLDAVES SIHENTRIVW CETPSNPMLT ITDLLTVSRL AHEAGALCVC DNTWATPVLQ
HPLDLNCDIV MHSTTKYFSG HSDVLGGALV FKRNDEFAQR VRLLQGLSGA VPSPFDCWLV
SRGLKTLGVR VRAQSLTAQA VAEFLDGHPA VEKVHYPGLP NHPDRALIQQ QMNGPGAMLS
VQVKGGADEA IRFIGKLKLF TRATSLGGVE SLIEHRASVE GPTSATPKNL LRLSIGLEHS
EDLINDLAQA LSL