Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1506 |
Symbol | |
ID | 8725240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1820317 |
End bp | 1821438 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | Cystathionine gamma-synthase |
Protein accession | YP_003386355 |
Protein GI | 284036425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.39212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTCG ATACCCTCGC CCTCCGCGCC ACACATCAGT CCGACCCGGA AACCGGAGCC GTAGCTCCGC CTATTCATCT CTCCACCACG TTTGCCCGCA ACGAAGCCAA TGAACTGGTG GGAGACTATA CTTACACCCG CCCAAACAAC CCCACCCGCG AAGCGCTGGA AAAAGCGATT GCGCTACTCG AAGGCGGAGC AGTAGGGATG GCGTTTGGCT CCGGTCAGGC CGCTACCATG ACGCTTTTTC AGGCACTTCG CCCTGGCGAC CATGTGCTTC TGTCGACCGA TGCCTACTAC GGCACGCCCG CCCTGCTCGA ACAGGTTTTT CATCCCTGGG GGCTGACCTA CACCCGCGTC GACATGAGCG ACCTCGATGC CGTCGAGTCA TCCATCCACG AGAATACCCG CATTGTGTGG TGCGAAACGC CTTCCAACCC AATGCTGACC ATAACGGATT TGCTGACGGT AAGTCGGCTG GCGCACGAAG CCGGTGCCCT TTGCGTATGC GACAACACCT GGGCAACGCC GGTGCTCCAA CACCCCCTCG ACCTGAATTG CGATATTGTG ATGCACTCAA CCACCAAGTA TTTCAGCGGT CATTCCGATG TACTGGGCGG GGCGCTGGTC TTTAAACGCA ATGACGAATT TGCGCAGCGG GTGCGGCTAT TACAGGGACT ATCGGGGGCG GTACCCTCAC CGTTCGACTG CTGGCTGGTG AGCCGGGGGC TTAAAACCCT GGGCGTTCGG GTGAGGGCAC AAAGCCTGAC GGCTCAGGCC GTAGCCGAAT TTCTGGATGG GCACCCGGCC GTAGAGAAAG TTCATTACCC AGGCTTACCC AATCATCCGG ACCGGGCGCT GATTCAGCAG CAGATGAACG GACCGGGTGC CATGCTGTCT GTTCAGGTGA AGGGCGGGGC CGATGAAGCC ATTCGGTTTA TTGGCAAACT GAAACTGTTC ACCCGCGCTA CCAGTCTGGG CGGTGTCGAG AGTTTAATTG AACACCGGGC GAGTGTAGAA GGCCCTACCT CCGCCACGCC AAAAAATCTG CTACGTCTCT CTATAGGTCT CGAACATTCC GAAGACTTGA TCAACGATCT GGCGCAGGCG TTGTCGTTAT AA
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Protein sequence | MHFDTLALRA THQSDPETGA VAPPIHLSTT FARNEANELV GDYTYTRPNN PTREALEKAI ALLEGGAVGM AFGSGQAATM TLFQALRPGD HVLLSTDAYY GTPALLEQVF HPWGLTYTRV DMSDLDAVES SIHENTRIVW CETPSNPMLT ITDLLTVSRL AHEAGALCVC DNTWATPVLQ HPLDLNCDIV MHSTTKYFSG HSDVLGGALV FKRNDEFAQR VRLLQGLSGA VPSPFDCWLV SRGLKTLGVR VRAQSLTAQA VAEFLDGHPA VEKVHYPGLP NHPDRALIQQ QMNGPGAMLS VQVKGGADEA IRFIGKLKLF TRATSLGGVE SLIEHRASVE GPTSATPKNL LRLSIGLEHS EDLINDLAQA LSL
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