Gene Slin_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1504 
Symbol 
ID8725238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1819120 
End bp1819719 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID 
Productflavoprotein-like protein 
Protein accessionYP_003386353 
Protein GI284036423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0437844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CGCTGATTTC TACTTCATCA CGCAAAAACA GCAACTCGCT GCGCTTTGTT 
AGTTACATGC GCAACCTATT GGTTAGCGAG GGGCAGCACG AGGTTTCGAT TGTGTCGTTC
GAAGACTATG ATATACCGTA TGTTGGACAG GGGTCGGTAA AAAAAGACGC CCTGACGCCC
TTCCAATCCG AGCTGATCGG CGCCTGGGAA TCGGCTGATC TGGTACTGTT TGCCATGCCC
GAATACAACT GGACAGCTCC TCCTCAGGCC ACCAACGCCA TCCATCAATT GGGTGGTCCG
GGTTTTAAAC AACTGTTCGA TAACAAAGTA TTTGCCATGG TGGGTATCTC CAACGGCCGG
GGTGGCCGCC AGCCCGCGCT GGACATGACC ACGGTGGTTA ACAAAATTAT CAGCTTCACA
AATAGCTACT CCATCATTTC GCCGAAGCTG TATGAGTCGC ACGAGACGGA CAAGAATATC
GACGAAAACG GCAACTTTTA CGGTCATGAA GTATACGAGC GGACGGCAAA AGCGTTTTTG
GAGTACACCC TGAACGTAGC GCAGCGGTGG GTTGGCAACG AACAGCTGGC CGACAGGTAA
 
Protein sequence
MKITLISTSS RKNSNSLRFV SYMRNLLVSE GQHEVSIVSF EDYDIPYVGQ GSVKKDALTP 
FQSELIGAWE SADLVLFAMP EYNWTAPPQA TNAIHQLGGP GFKQLFDNKV FAMVGISNGR
GGRQPALDMT TVVNKIISFT NSYSIISPKL YESHETDKNI DENGNFYGHE VYERTAKAFL
EYTLNVAQRW VGNEQLADR