Gene Slin_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1495 
Symbol 
ID8725229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1810314 
End bp1811081 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function DUF1486 
Protein accessionYP_003386344 
Protein GI284036414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.692441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC AGATATCCAG TCAGATCATG CAACAGCAAC AAATCAATAA ATCAATTATT 
CGTGATTTCT ATCGCCGGGC AGTAGCACAA GGCGATATTG CCTTCGCCGA GCAGGTAATT
GCCGACAATT ATATTCAGCA TAGCCCAGGA TTAAAGCCTG GCAAAGCCGG TGTGCTTGAG
GCTCTTCACC TGATGAAGCA AATGCCAAAG CCACCCGCCA CGTCGACACC TTTTATGCGG
CTCATTGCCG AAGGCGACTA TGTGGTTACG AACCTTTGTT TCAATTGGGG AGGCATTCAG
AAAGTGGTCG TCGACATTTT TAGATTCGAG CATGGGAAAG TAGCCGAACA TTGGGACGCG
GTCGAAGATC AACCCGCAAC TACGCTCAAT GGCAACGCGA TGATGGATGG CCCGATACCA
GTTGACGATC TGGCGCTAAC GACCTCAAAC AAGGCAATTG CACGAGACGC GTATCAACAG
ATTTACATTG ACCGTCAACG CCACCGGTTA CCCGATTTTG TGCTGCCCGA TTTCATTCAG
CACAAGCCAG ACATTGCTGA TGGCCGGGCC GGCTTATCGG ATTACCTGAG TCAGAATTCC
AGCTCACTGT CTATTAACCG CATCCTGCTG ATCGTTGCAG AAGGCGACTT TGTGGTCATT
CAATCGGAGG GAATAGCTAA CGGGAAACCT GCTCAGTTCT ATGAGATTTT TCGTCTCAGC
GAAAGCAAAC TAGCTGAGCA ATGGAGTGTT AATCGGTTGA CACAGTAG
 
Protein sequence
MSTQISSQIM QQQQINKSII RDFYRRAVAQ GDIAFAEQVI ADNYIQHSPG LKPGKAGVLE 
ALHLMKQMPK PPATSTPFMR LIAEGDYVVT NLCFNWGGIQ KVVVDIFRFE HGKVAEHWDA
VEDQPATTLN GNAMMDGPIP VDDLALTTSN KAIARDAYQQ IYIDRQRHRL PDFVLPDFIQ
HKPDIADGRA GLSDYLSQNS SSLSINRILL IVAEGDFVVI QSEGIANGKP AQFYEIFRLS
ESKLAEQWSV NRLTQ