Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1492 |
Symbol | |
ID | 8725226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1806034 |
End bp | 1807572 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function UPF0027 |
Protein accession | YP_003386341 |
Protein GI | 284036411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00457459 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAA CGATTTCACT AGACGATATT TTAACATTAG GCCCCATTCC GGAGCCGCTA CAAGCAGGTT TCCTGCGGGT GGCCAATGGC CTGATGCTGC GGGGTAATTA CCCCAAAGAG AAAGTGATGA CGCTCCTGGC GCAGATGCTC CAGAATCCGA AAAAATACGC TTTCTCGAAA AACAAGGTCA CGAATCTGGC GCAGGCGATT TATGACCTCA ATAAGCAGGG TATTGCCGTT CCGCTGAGCG AAGCGGGTGC CGACTACTTA CCCGCCGAAC CCGCGCCTTA CGCTTTGCCG ACTTCGGAGA AACAGGCCGA ACAAACGATT GGTCTGCGTG AAGGGCCCTT ACCGTATGCC GTTTTTGGTC GGGACTTTAT TGAAGAAGGC GCGTTGAAAC AGATGGAAAC AGCCTCAAGC CTACCCATTT CGGTGGCGGG GGCACTCATG CCTGATGCGC ACCAGGGGTA TGGGCTGCCT ATTGGGGGGG TGCTGGCTAC GGAAGCTACC AAAGTTATTC CATTCGCCGT GGGTGTCGAT ATTGCCTGCC GAATGTGTTT GTCGGTGTTC GACCTGCCGC CGTCCTTCTT AACGCGCGAA CCGCACCTGC TGAAGCGAGT ATTGGTCGAA CAAACGAAGT TCGGGATGGG GGGTGAAACC CGTGAGAAGT TCGACGAGAG CGTGATGGAC CTACCGGAAT GGCAGGCCAC TAAAGTGATC CGCGATCTGA AAGATAAAGC GTATCGTCAA TTGGGCACTT CGGGGACTGG GAATCACTTT GTGGAATGGG GTATTGTGGA AGTACACGAA GATAGTGTGA CAAAAGAATC GGGGCTGAAT CTGCCGCCGG GCGAATACCT CGCGCTGTTG TCACACTCCG GTTCGCGCGG GTTTGGGGCC AATATTGCCA ACACCTATTC CAAACTGGCG ATGCAGAAAA CCAGACTGCC CCGAGAAGCC GCTCACCTGG CCTGGCTCGA CCTGAATACG CAGGAAGGGC AGGAGTACTG GATCGGGATG AATCTGGCGG GCGAGTATGC CTCGGCTAAC CACCACGAGA TTCACCATAA ACTGGCCAAA GCGTTACGCG AGAAGCCGCT GGTCATGGTC GAAAATCACC ACAACTTTGC CTGGAAAGAG CAACTGGCCG ATGGCCGGGA GGTGCTTGTT CACCGCAAGG GAGCAACCCC GGCAGGAACG GGTGTGCTAG GTATCATTCC GGGGTCGATG ACGCAGCCAG GCTTTGTTGT GCGTGGTCGT GGCAATATAG CGTCGATAAA TTCGGCTTCT CACGGAGCCG GACGGCTGAT GTCACGAACG AAGGCATTTA ATAGCATTAC GCGCTCGCAG TGGAATAAAG CGCTGGTCGA AGCCGGGGTG CAACTCGTGG GGGGCGACCT GGACGAAGCC CCGATGGTCT ATAAAAACAT CGACACCGTC ATTGAAGCCC AGCATGATCT GGTAGACGTT CTGGCGAAGT TCACCCCTAA AATCGTTCGA ATGGCCGACG CGAATCGGAA AGAAGGGCGG GAAGATTAA
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Protein sequence | METTISLDDI LTLGPIPEPL QAGFLRVANG LMLRGNYPKE KVMTLLAQML QNPKKYAFSK NKVTNLAQAI YDLNKQGIAV PLSEAGADYL PAEPAPYALP TSEKQAEQTI GLREGPLPYA VFGRDFIEEG ALKQMETASS LPISVAGALM PDAHQGYGLP IGGVLATEAT KVIPFAVGVD IACRMCLSVF DLPPSFLTRE PHLLKRVLVE QTKFGMGGET REKFDESVMD LPEWQATKVI RDLKDKAYRQ LGTSGTGNHF VEWGIVEVHE DSVTKESGLN LPPGEYLALL SHSGSRGFGA NIANTYSKLA MQKTRLPREA AHLAWLDLNT QEGQEYWIGM NLAGEYASAN HHEIHHKLAK ALREKPLVMV ENHHNFAWKE QLADGREVLV HRKGATPAGT GVLGIIPGSM TQPGFVVRGR GNIASINSAS HGAGRLMSRT KAFNSITRSQ WNKALVEAGV QLVGGDLDEA PMVYKNIDTV IEAQHDLVDV LAKFTPKIVR MADANRKEGR ED
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