| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1490 |
|---|
| Symbol | |
|---|
| ID | 8725224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1802973 |
|---|
| End bp | 1804019 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386339 |
|---|
| Protein GI | 284036409 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0815411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGCTA ACCGAAACGC CCTTGTTCGA TACAAAACGC TGGATGCCTG TCTGCGCAAC
CGGCAACGCA AATGGACACT CGACGACCTG ATCGAGAAAG TATCAGAAGC CTTGTATGAA
TACGAAGGGC TGGATAAAGG CATCAGTCGC CGTACCGTGC AGGCCGACCT TCAGATGATG
CGTAGCGATA AGCTGGGGTA CTTTGCGCCC ATTGTTGTCA TCGACAAAAA ATATTACACC
TACGAAGACC CGGCCTATAG CATCACCAAC ATACCCCTGT CGGATGGCGA TCTGTCGCGG
ATGAACGAAG CGGTCGAAGT ACTCAAGCAG TTCAAGGGAT TCTCGCATTT TACGGCGCTC
AATGAAGTGG TTCAGAAGCT GGAAGACCAT GTGTATTCGA CCGCCCGCAA GTCGGCCCCG
GTTATTGACT TCGAGAAAAA CGAGAGTTTA AAAGGGCTGC ACTACCTGGA TGAGCTGTAT
CAGGCCGTCA TTCAGCAACA TACACTCCGC ATTGAGTACC AGTCGTTTTC GGCGCGGTTG
CCCCAAACCT TTACGTTTCA TGTGTGGTGG TTGAAAGAAT TCAAGAACCG CTGGTTCGCG
GTGGGTGTGT GTGATAGTAA ACAGTATACC ATGAACCTGG CTCTCGACCG TATGCTGGGC
ATAACGCCAG CACCAGACAT TGACTATATC GCCAACCAAC ACCTGGACCC CGATGTGTAT
TACCGGGATG TGATTGGGGT GTCGGTCAGC GCACGGATGC GGCCGGCAAA GGTCAGGCTG
TTTGTGAGCC AGTTTCACGC GCCTTATGTC GAGACCAAGC CACTACACCA ATCGCAGCAG
GTGGTTGAGC GCAGGCCCGA TGGCATCGTT ATCCAGCTCA CAGTTCAGCA CAATTTCGAG
CTCGAAAAAG AAATTCTGGG GTTCGGTGAG GGGATGCAGG TGCTGGAGCC GGAACGTCTG
CGCCGGGTTA TTATCAGGCG GTTACAGGCG GGCGTGGATG CCTACACAAA ACCGGAAACA
CCGGTAGCAA CAGACACACA GGTTTGA
|
|---|
| Protein sequence | MPANRNALVR YKTLDACLRN RQRKWTLDDL IEKVSEALYE YEGLDKGISR RTVQADLQMM
RSDKLGYFAP IVVIDKKYYT YEDPAYSITN IPLSDGDLSR MNEAVEVLKQ FKGFSHFTAL
NEVVQKLEDH VYSTARKSAP VIDFEKNESL KGLHYLDELY QAVIQQHTLR IEYQSFSARL
PQTFTFHVWW LKEFKNRWFA VGVCDSKQYT MNLALDRMLG ITPAPDIDYI ANQHLDPDVY
YRDVIGVSVS ARMRPAKVRL FVSQFHAPYV ETKPLHQSQQ VVERRPDGIV IQLTVQHNFE
LEKEILGFGE GMQVLEPERL RRVIIRRLQA GVDAYTKPET PVATDTQV
|
|---|
| |