| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1475 |
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| Symbol | |
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| ID | 8725209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1786412 |
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| End bp | 1787815 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003386324 |
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| Protein GI | 284036394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.260545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAG AGTTCGAAGA ACGAGAAGGC GATATTAAAG AATCTATCCG GCGTTTTGAG
CAGATGCTGG ACCAGCAGCA AAGCCAGTTT TTCGACCTGG ACGTCTATGA ACAAATGGTT
GAGCACTACC TCAATCAGGG TGATTTAGAC AAGGCGCTTA AAGCCGCCGA ATCCGGTCTG
GAAAACTTTC CCTATGCCCT GGAATTAATG CTTGACAAAG CCCAGATTAT GGCCAATTTC
CAACGGTTCG ATGAGTCGCT GGATTTACTG GAACGGGCTT CCTTATTTAA CCCCGGCGAC
CTCGATGTTC CTTTCATGCA GGGCTCTGTC CTGAATATGG CCGGTCGGTA CGAAGAATCA
ATCCAGGTGC TGGAAGAACT GCTCGATCGG GCTGAAGAGA AGGACGATAT TTTGTTTCAA
CTGGGCCAGA GCTATCAGAA CTGGGGTAAA TACGACGAGG CTATCACGCA ATACAAGAAG
TCCATTGCGC TGAATATCAA TAACGAAAAT GCACTGTATG AGCTTGCGTT CTGTCTGGAT
GTAACGGGTG AACTGGAAAA TAGTCTGGCT TACTACCAGC AGCTAATCGA TTCCGATCCT
TACTCATACA ACGCCTGGTA CAACATTGGT ATCGCTTACA GCAAACTTGG GCGCTACGCC
GAAGCCGCTG AAGCGTACGA TTATGCCGTT ATCATCAAAG GTGATTTTGC ATCGGCGCAT
TTCAATCTGG GCAACACCTA CATGAATCTG GGGTTGTTCG AGAAAGCCGA AAGCTGTTAC
CGCGAAACGC TGAAGTACGA AGAAGCCACC GCCGATACGT ATTGTCACTT GGGTGCCAGC
CTGGAAAAGC AGGATCGTAT AACGGAGGCC ATTAAAGAAT ATCGGGAGGC TATCAAACTG
GACCCCATGT GGGACGAAGC TTGGTATGGT ATCGGTGTGT GCCTGAGCGA ATCGGGTAAG
TGGTACGAAG CGCTGCCATT TTTGCAGAAA GCAGTTAAAC TAAGCGATCA GAACGGCGAG
TACTATCTGG CCGTAGCCGA AACGGAGTAC AAAATCGGGA ATGTACTGTC GAGTGTCGAG
GCTTTCGAGA AAGCTGCCGA AGTTGATGCC GCGAACCCCG ATGTGTACCT GACCTGGTCA
CTCGTTCCGT TCGATCAGGG CGATTTTCTG AAAGCTAACG ATATTATCCA GTCGGGAATC
AACGATATGC CTGCCGAAGC GGATCTGTAC TACCGCTCTG CCGTCTATCT GATTCATGCT
GGTCACTACC GCGAATCGCT GATTCAGCTG GAAGCGGCTC TCTCGCTGGA TTATGACGCG
CACGTGCAGC TTTTTGAGTT TTTCCCCGAA CTGGAAAAAC AGAAGGCACT CTATAAAATC
ATTCAGCAGT ACAAAAAAGA GTAA
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| Protein sequence | MEQEFEEREG DIKESIRRFE QMLDQQQSQF FDLDVYEQMV EHYLNQGDLD KALKAAESGL
ENFPYALELM LDKAQIMANF QRFDESLDLL ERASLFNPGD LDVPFMQGSV LNMAGRYEES
IQVLEELLDR AEEKDDILFQ LGQSYQNWGK YDEAITQYKK SIALNINNEN ALYELAFCLD
VTGELENSLA YYQQLIDSDP YSYNAWYNIG IAYSKLGRYA EAAEAYDYAV IIKGDFASAH
FNLGNTYMNL GLFEKAESCY RETLKYEEAT ADTYCHLGAS LEKQDRITEA IKEYREAIKL
DPMWDEAWYG IGVCLSESGK WYEALPFLQK AVKLSDQNGE YYLAVAETEY KIGNVLSSVE
AFEKAAEVDA ANPDVYLTWS LVPFDQGDFL KANDIIQSGI NDMPAEADLY YRSAVYLIHA
GHYRESLIQL EAALSLDYDA HVQLFEFFPE LEKQKALYKI IQQYKKE
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