Gene Slin_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1466 
Symbol 
ID8725200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1775615 
End bp1776328 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003386315 
Protein GI284036385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.10731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTT TCATAAACGA CCGCCCTATC CGGCTCGTTG GCCCAAAAGC CGCTACTCAA 
CTGACCAATC CGGCATTGGC AAATCACCCC ACATTCGTCG ATTACGATCT AATCGTCGAT
GCCCGTCTGG AGCTGCTGAA ACAAGATGCC CTGAATGGTC ATTTGCTGTT GCTGAACGCT
ACCCCGGCTA CGGTCAGTAA ACTGTTAGCT CTATTGCAGA AAAGCGATGC AGATCAGTTG
CTTTCCGTTA CGCTGGGCTG CCTTGATAAG GAGGCCTGCG AAGAAGCCAT AAAGAAACCA
TTCAAGATCA TAAAAGCCGC TGGTGGGGTC GTCTTTAAAG GCGACAAGAT GTTGCTTATG
TTCCGCCGGG GCGTCTGGGA TTTACCAAAA GGGAAACTTG ATGACGGCGA ATCCTCCAAG
CAGGGGGCCG TTCGGGAAGT AAAAGAAGAA ACGGGTGTTC GGGTATCTAT TGGCGAACGC
ATCTGTACAA CCTGGCATAC CTACACCCTA AATGGAAGTC GTATTCTAAA GCGTACCAAA
TGGTATCGGA TGCGGGCCCT CGACGATAGC CGCATGGCAC CACAAGTTGA GGAAGATATT
GAGCAACTCG TCTGGTTCGA CCAGCGGGAA ACCAAACTGG CCCTTACCAA CTCTTTCAGT
TCGATTCGGT ACGTTATCGA TGAAGTCAAC AAGCGGGTAA ACGGCAAGGT GTAA
 
Protein sequence
MIVFINDRPI RLVGPKAATQ LTNPALANHP TFVDYDLIVD ARLELLKQDA LNGHLLLLNA 
TPATVSKLLA LLQKSDADQL LSVTLGCLDK EACEEAIKKP FKIIKAAGGV VFKGDKMLLM
FRRGVWDLPK GKLDDGESSK QGAVREVKEE TGVRVSIGER ICTTWHTYTL NGSRILKRTK
WYRMRALDDS RMAPQVEEDI EQLVWFDQRE TKLALTNSFS SIRYVIDEVN KRVNGKV