Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1460 |
Symbol | |
ID | 8725194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1770575 |
End bp | 1771174 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386309 |
Protein GI | 284036379 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00443497 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.661074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTTG AATGGATAAT GAGTGCCTGC ATTGGAATCG GCTTGGCGGC CTGTTGTGGC TTCCGGGTAT TTGTGCCGCT TCTGGTTGCC AGTCTGGCCA CTAAATTGGG ATTTATCAAT ACGATGACCG GCTTCGAATG GCTCAGCGGC TGGCCCGCCC TTTTGGGACT AAGCGTAGCT ACCCTCTTTG AGCTTGGAGC CTACTATATC CCCTGGCTCG ATAACATGCT CGACACGATA GCGACTCCAA CCTCCATCAT TGCCGGAACC CTGTTGAGTA CGTCTTTTCT TCAAATAGAT AATCCGTTAC TTCATTGGGG GCTTGGGTTG ATGCTCGGCG GCAGTACGGC AGGAATCATT CAGGCGGGAA CCAGTCTGCT CCGGCTTGGT TCCACGGCCA CCACCGGCGG GCTTGCCAAT CCAGTAGTGG CAACGGGCGA AAATGTGGCC TCCATAGGGC TCTCCATCTT CAGCATTTTA TTACCATTAG TGGCAGCTGT CGTTATCTTC CTGGTGCTAA TTTTTATTAT CAGCCGACTG GTAGCCCGCC GAAAAATCTG GTTTACCCGC GCCGATAAGT CGCCGAATCT TAGCCGATAG
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Protein sequence | MSLEWIMSAC IGIGLAACCG FRVFVPLLVA SLATKLGFIN TMTGFEWLSG WPALLGLSVA TLFELGAYYI PWLDNMLDTI ATPTSIIAGT LLSTSFLQID NPLLHWGLGL MLGGSTAGII QAGTSLLRLG STATTGGLAN PVVATGENVA SIGLSIFSIL LPLVAAVVIF LVLIFIISRL VARRKIWFTR ADKSPNLSR
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