Gene Slin_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1460 
Symbol 
ID8725194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1770575 
End bp1771174 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386309 
Protein GI284036379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00443497 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.661074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTG AATGGATAAT GAGTGCCTGC ATTGGAATCG GCTTGGCGGC CTGTTGTGGC 
TTCCGGGTAT TTGTGCCGCT TCTGGTTGCC AGTCTGGCCA CTAAATTGGG ATTTATCAAT
ACGATGACCG GCTTCGAATG GCTCAGCGGC TGGCCCGCCC TTTTGGGACT AAGCGTAGCT
ACCCTCTTTG AGCTTGGAGC CTACTATATC CCCTGGCTCG ATAACATGCT CGACACGATA
GCGACTCCAA CCTCCATCAT TGCCGGAACC CTGTTGAGTA CGTCTTTTCT TCAAATAGAT
AATCCGTTAC TTCATTGGGG GCTTGGGTTG ATGCTCGGCG GCAGTACGGC AGGAATCATT
CAGGCGGGAA CCAGTCTGCT CCGGCTTGGT TCCACGGCCA CCACCGGCGG GCTTGCCAAT
CCAGTAGTGG CAACGGGCGA AAATGTGGCC TCCATAGGGC TCTCCATCTT CAGCATTTTA
TTACCATTAG TGGCAGCTGT CGTTATCTTC CTGGTGCTAA TTTTTATTAT CAGCCGACTG
GTAGCCCGCC GAAAAATCTG GTTTACCCGC GCCGATAAGT CGCCGAATCT TAGCCGATAG
 
Protein sequence
MSLEWIMSAC IGIGLAACCG FRVFVPLLVA SLATKLGFIN TMTGFEWLSG WPALLGLSVA 
TLFELGAYYI PWLDNMLDTI ATPTSIIAGT LLSTSFLQID NPLLHWGLGL MLGGSTAGII
QAGTSLLRLG STATTGGLAN PVVATGENVA SIGLSIFSIL LPLVAAVVIF LVLIFIISRL
VARRKIWFTR ADKSPNLSR