Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1456 |
Symbol | |
ID | 8725190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1766813 |
End bp | 1767742 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | protein of unknown function UPF0187 |
Protein accession | YP_003386305 |
Protein GI | 284036375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.205773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.5655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTT ACAAGAATAA AGGATTACTG CAATCTATTT GGCATTTTCA TACCGGCCCC ACGGCTAAAG CACTGATGGG CCGGTTAGTA GTCGTTGCTA TTTATGTAAC CATCGTTACG GTTGCCGAAA TGCACTACAC AGACTTACGG CTGAAAGATA CACCTTCTTC GTTTCTGGGT GCAATGGGTA TTCTGCTCAG TCTGTTGCTT ATTTTTCGGA CCAACACCGC TTATGACCGG TTTTATGAAG GGCGTCAGGC GTGGGGCGTG CTGGTCAACA ACTGCCGGAA TCTGGCCATT TATTTCAACG CTGTTTTGCC GGAAGGCGAT GCCAGAAGCC GGGAGTTTTA TGCCAAGGCA ATCGCTAATT TTCCCTTCGC GCTAAAGAAT CATTTGCGCG ACAGCAATAA CACCGCCGAA CTCGATATCG TAGAAGAAGG AGAACGACGT GACCTGAGCC ATTTTGACCA TAAACCAGCC GGAGTATCGA ATCAACTCTG GGTGAAAACA GAAAACCTCT ACCGCGAGGG ACATATTTCC GAATCACAGC ATATTAACCT AAACCAGTAT TTAACGACGC TGATGGACGT GTGCGGTGTA TGTGAGCGGA TCAAAAGTAC GCCCATTCCA TTCTCCTACA TGCTTTTCAT CAAGCTGTTC ATTATGCTTT ATGTGACGCT GCTGCCCTTT ACGGTCGTAA CGGCTTTTGG TTATCTGACA ATCCCGGCTG TTGTCCTCAC GTCGTATATA CTGGTTGGGC TGGAAATGAT CGGCGAAGAA ATTGAAGAAC CTTTTGGTCT GGAGCGAAAC GACCTGCCCT TGAATCAGTT AAGTCAGCTA ATTCGTGTGA ATGTTCACGA CATTTTGCAG ATTTATTTGC CGCATGTCGA GAAACAGGCG GCCAAGCCGG GTTTCACCAT AGTGACCTAA
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Protein sequence | MIIYKNKGLL QSIWHFHTGP TAKALMGRLV VVAIYVTIVT VAEMHYTDLR LKDTPSSFLG AMGILLSLLL IFRTNTAYDR FYEGRQAWGV LVNNCRNLAI YFNAVLPEGD ARSREFYAKA IANFPFALKN HLRDSNNTAE LDIVEEGERR DLSHFDHKPA GVSNQLWVKT ENLYREGHIS ESQHINLNQY LTTLMDVCGV CERIKSTPIP FSYMLFIKLF IMLYVTLLPF TVVTAFGYLT IPAVVLTSYI LVGLEMIGEE IEEPFGLERN DLPLNQLSQL IRVNVHDILQ IYLPHVEKQA AKPGFTIVT
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