Gene Slin_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1456 
Symbol 
ID8725190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1766813 
End bp1767742 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein of unknown function UPF0187 
Protein accessionYP_003386305 
Protein GI284036375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.205773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.5655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTT ACAAGAATAA AGGATTACTG CAATCTATTT GGCATTTTCA TACCGGCCCC 
ACGGCTAAAG CACTGATGGG CCGGTTAGTA GTCGTTGCTA TTTATGTAAC CATCGTTACG
GTTGCCGAAA TGCACTACAC AGACTTACGG CTGAAAGATA CACCTTCTTC GTTTCTGGGT
GCAATGGGTA TTCTGCTCAG TCTGTTGCTT ATTTTTCGGA CCAACACCGC TTATGACCGG
TTTTATGAAG GGCGTCAGGC GTGGGGCGTG CTGGTCAACA ACTGCCGGAA TCTGGCCATT
TATTTCAACG CTGTTTTGCC GGAAGGCGAT GCCAGAAGCC GGGAGTTTTA TGCCAAGGCA
ATCGCTAATT TTCCCTTCGC GCTAAAGAAT CATTTGCGCG ACAGCAATAA CACCGCCGAA
CTCGATATCG TAGAAGAAGG AGAACGACGT GACCTGAGCC ATTTTGACCA TAAACCAGCC
GGAGTATCGA ATCAACTCTG GGTGAAAACA GAAAACCTCT ACCGCGAGGG ACATATTTCC
GAATCACAGC ATATTAACCT AAACCAGTAT TTAACGACGC TGATGGACGT GTGCGGTGTA
TGTGAGCGGA TCAAAAGTAC GCCCATTCCA TTCTCCTACA TGCTTTTCAT CAAGCTGTTC
ATTATGCTTT ATGTGACGCT GCTGCCCTTT ACGGTCGTAA CGGCTTTTGG TTATCTGACA
ATCCCGGCTG TTGTCCTCAC GTCGTATATA CTGGTTGGGC TGGAAATGAT CGGCGAAGAA
ATTGAAGAAC CTTTTGGTCT GGAGCGAAAC GACCTGCCCT TGAATCAGTT AAGTCAGCTA
ATTCGTGTGA ATGTTCACGA CATTTTGCAG ATTTATTTGC CGCATGTCGA GAAACAGGCG
GCCAAGCCGG GTTTCACCAT AGTGACCTAA
 
Protein sequence
MIIYKNKGLL QSIWHFHTGP TAKALMGRLV VVAIYVTIVT VAEMHYTDLR LKDTPSSFLG 
AMGILLSLLL IFRTNTAYDR FYEGRQAWGV LVNNCRNLAI YFNAVLPEGD ARSREFYAKA
IANFPFALKN HLRDSNNTAE LDIVEEGERR DLSHFDHKPA GVSNQLWVKT ENLYREGHIS
ESQHINLNQY LTTLMDVCGV CERIKSTPIP FSYMLFIKLF IMLYVTLLPF TVVTAFGYLT
IPAVVLTSYI LVGLEMIGEE IEEPFGLERN DLPLNQLSQL IRVNVHDILQ IYLPHVEKQA
AKPGFTIVT