Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1455 |
Symbol | |
ID | 8725189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1765997 |
End bp | 1766770 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | diaminopimelate epimerase |
Protein accession | YP_003386304 |
Protein GI | 284036374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0568169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.427819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCT TTAAATACCA GGGTACCGGC AATGATTTTA TCCTGATCGA CGACCGGGCC AGAACTTTTC CCGCAGCCGA TCAGGCGTTT ATCGAGCACC TGTGCCACCG GCGCTTCGGC ATCGGAGCCG ATGGGCTGAT TCTCCTCCAG AATGACCCGG AGTACGATTT CAGGATGGTT TATTTTAATG CCGACGGCGC TGAAGGCAGC ATGTGTGGCA ATGGTGGCCG GTGCATTGTC CGGTTTGCCC ACGACTTAGG CCTGTTCGAC AGCGAAACCC GTTTTCTGGC CGTAGATGGC GAACATCTGG CGATGGTTTC CGACGAAAGT ATCTCGTTAA AAATGACAGA TGTCACCGGC ATTGAAGATC GCCAGGGGCT GACCTTTCTA AATACGGGTT CGCCCCATGT CGTACGTTTT GTTGATGACC TGGAATCGTT TGATGTCGTA GCTGAAGGGC GGTCCATTCG CTATAGCGAG CCATTTCAGC CGGGTGGGAC AAACGTGAAC TTTGCCCAGG TAGTTGATGA AAACACGGTG TTTGTCAGAA CCTATGAACG GGGGGTAGAA GATGAAACGT ACTCGTGCGG TACTGGGGTA ACGGCTGTCG CGCTGGTTGC TCATCAGCAG CTAGGCATGC CCGCCCCCGT TTTTATCCGT ACCCTTGGCG GCAACCTTCG CGTATCATTC AATCCTCAGC CCAACGGCGG CTTTGATTCC ATTTACCTTA TAGGACCAGC AAAGCGGGTT TTTGCCGGAA CCATAACTGT TTAG
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Protein sequence | MDFFKYQGTG NDFILIDDRA RTFPAADQAF IEHLCHRRFG IGADGLILLQ NDPEYDFRMV YFNADGAEGS MCGNGGRCIV RFAHDLGLFD SETRFLAVDG EHLAMVSDES ISLKMTDVTG IEDRQGLTFL NTGSPHVVRF VDDLESFDVV AEGRSIRYSE PFQPGGTNVN FAQVVDENTV FVRTYERGVE DETYSCGTGV TAVALVAHQQ LGMPAPVFIR TLGGNLRVSF NPQPNGGFDS IYLIGPAKRV FAGTITV
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