| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1422 |
|---|
| Symbol | |
|---|
| ID | 8725156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1728969 |
|---|
| End bp | 1731251 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1680 |
|---|
| Protein accession | YP_003386271 |
|---|
| Protein GI | 284036341 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.428296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.497833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGA CCCTACTCCA CATCGCCCTC CTTTTGCTGA TCGGCCTCTC GTCAAAAGCG
CAGATGCAGC CGTTTGCCTT ACAGGACGTG AAGGTAACGG GCGGGCCATT TAAGAATGCG
CAGGATGTTG ACCTGAAGTA TATTCTGGCG CTGAACCCGA ATAAACTGCT GGCTCCGTAC
CTGATCGACG CTGGCTTGCC GGAAAAAGCA CCGCGCTACG GCAACTGGGA AAGCTCAGGG
CTGGACGGGC ACATTGGCGG GCATTATCTC TCGGCGCTGG CCATGATGTA TGCCTCGACG
GGCAATGCAG AAACAAAAAA GCGGCTGGAT TATATGGTCG ATCAACTGGC GCAATGTCAG
GCGAAAAACG GCAACGGGTA CGTGGGCGGC ATTCCGCAGG GCAAAGTATT CTGGGAACGG
ATTCACAAAG GCGACATTGA CGGGAGCAGT TTCGGGCTGA ACAATACATG GGTGCCCTTG
TACAATATTC ACAAGCTGTT TGCGGGCCTG CGCGATGCCT ACGAGTATGC CGGAAACCAA
CAGGCCAAAC AGGTGCTGAT CGGTCTGGGC GACTGGTTCG TGGAGCTGAT AAAACCCCTG
TCCGACGAGC AGATTCAGCA GGTGTTACGC ACCGAGCATG GCGGTATCAA CGAAACCTTC
GCCGATCTGT ACATCCTGAC GAAAGACCAA AAGTACCTCG AAACAGCGCA GCGCATCTCG
CACCGGGCCA TTCTGGACCC GCTCATTGAC AAACAGGACA AACTGACGGG ATTGCATGCC
AACACGCAGA TTCCGAAGGT GATCGGGTTT GAAAAAATTG CTACGCTGAC GGGTAAGTCC
GACTGGTCGG ACGCGGCTCA ATATTTCTGG CAGAACGTAT CGCAGACCCG AAGTGTCGCC
TTCGGAGGTA ACAGCGTTCG GGAGCATTTC AATCCGACAA CGGATTTTAG CCAGCTATTG
CGCTCGAATC AGGGGCCGGA AACCTGCAAC TCGTTCAACA TGCTACGTCT GAGCAAAGCT
CTGTTTCTGG ACAAGAACGA CGTAAGCTAC CTCGATTTCT ACGAGCGGAC AATGTATAAC
CACATCCTGT CGAGCCAGCA CCCCGAGAAA GGTGGGTTTG TGTATTTCAC GCCCATTCGG
CCGAACCATT ACCGGGTCTA TTCGCAGCCC GAGACCAGCA TGTGGTGCTG TGTGGGGTCG
GGTATCGAGA ACCACACCAA ATACGGCGAA CTGATCTACA GCCACTCGGC TAATGATCTG
TTCGTCAACC TGTTCATTCC GTCGACGGTG AATTGGGCAG ACAAAAAGCT GAAACTTACC
CAGCAGACCC AATTCCCGTA TCAGAACCAA TCTGAACTGA TCATCGAGAC ATCAAGACCA
CAGGAACTTT CACTGAATAT CCGATACCCG AAATGGGCCG AAAACCTGGA GGTGCTGGTG
AATGGCAAGG CGCAACCCGT TACCGGAAAA CCAGCCAGTT ACGTAGCCGT TAACCGGAAA
TGGAAATCGG GCGATAAAGT AACGGTGCGT TTCAAGACCA CTACACGGCT GGAGCAATTA
CCTGATGGCT CAAACTGGGC CGCTTTTGTC AACGGCCCCA TTGTGTTGGC GGCCAAAACC
TCGACCGCCG ACCTGACCGG ACTGTTCGCC GATGATAGCC GGATGGGTCA CGAAACCAAA
GGCAAGCTAT ACCCGATCAC CAACGCCTAT GCGCTCGTGG GTGACCCGGC AACGTACCTC
AATCGCCTGA AACCGGCTGG CAATCTGCAG TTTGGCCTGG ATTCGCTGAT GCTGCAACCA
TTTTACGAAG TACATGACGC CCGCTATCAA ATGTATTTCC CAACGTTCAC ACAGGCAGCA
TACGACGAGC AGAAAGCCAA GTTGAAACAG CAGGAAGCGG ACGTTCTGGC CCTCGAAGCT
ATCACAGTCG ATAAGGTAAA CTGTGGCGAG CAGCAACCCG AAGTCGACCA TCAGTATAAA
GGTGAAAAGA GCGAATCAGG GTACGATGAT GAGCAGTTTT GGCGACGCAC CCGTTCGTAT
ATAACATACC AGTTACAGAA CAAAAACCGG ACGGGTAAAT ACATTATCAT TCGTGCTTTA
GAGGATATTA AGCCGGAGAC TATGTCCTTT CTGATCAACG AAAAACCGGC CGAAATTCTT
TCTTCTGAGG GTAAAACGAT CCGACTGAGA GCCAATGATA ATGAAGTGAT TACAGTAAAA
ATCATGGCTC AGTCCGGGAC AAACACAGCC CGAATCAATC AAATCAGATT ACTAACGCGT
TAA
|
|---|
| Protein sequence | MKTTLLHIAL LLLIGLSSKA QMQPFALQDV KVTGGPFKNA QDVDLKYILA LNPNKLLAPY
LIDAGLPEKA PRYGNWESSG LDGHIGGHYL SALAMMYAST GNAETKKRLD YMVDQLAQCQ
AKNGNGYVGG IPQGKVFWER IHKGDIDGSS FGLNNTWVPL YNIHKLFAGL RDAYEYAGNQ
QAKQVLIGLG DWFVELIKPL SDEQIQQVLR TEHGGINETF ADLYILTKDQ KYLETAQRIS
HRAILDPLID KQDKLTGLHA NTQIPKVIGF EKIATLTGKS DWSDAAQYFW QNVSQTRSVA
FGGNSVREHF NPTTDFSQLL RSNQGPETCN SFNMLRLSKA LFLDKNDVSY LDFYERTMYN
HILSSQHPEK GGFVYFTPIR PNHYRVYSQP ETSMWCCVGS GIENHTKYGE LIYSHSANDL
FVNLFIPSTV NWADKKLKLT QQTQFPYQNQ SELIIETSRP QELSLNIRYP KWAENLEVLV
NGKAQPVTGK PASYVAVNRK WKSGDKVTVR FKTTTRLEQL PDGSNWAAFV NGPIVLAAKT
STADLTGLFA DDSRMGHETK GKLYPITNAY ALVGDPATYL NRLKPAGNLQ FGLDSLMLQP
FYEVHDARYQ MYFPTFTQAA YDEQKAKLKQ QEADVLALEA ITVDKVNCGE QQPEVDHQYK
GEKSESGYDD EQFWRRTRSY ITYQLQNKNR TGKYIIIRAL EDIKPETMSF LINEKPAEIL
SSEGKTIRLR ANDNEVITVK IMAQSGTNTA RINQIRLLTR
|
|---|
| |