| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1420 |
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| Symbol | |
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| ID | 8725154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1726687 |
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| End bp | 1728279 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003386269 |
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| Protein GI | 284036339 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.394008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.931127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTA GTAAAGGACT ACATAAGAAA GCACTGCTTT GGGCTGGTTT AATGGTCGTG
TTGCTACAAA CACAAAATAG GGTAGTTGCG CAAACAGCCA CGAACCCGGT CATTTTCGCT
GACGTGCCCG ACATGGCCAT GATTCGGGTG GGCAACACTT ACTACATGAG CAGCACGACT
ATGCACCTGA GTCCGGGGCT GCCCATCATG AAGTCGAACG ACCTGATCAA CTGGAAGATG
GTGGGGTACG CTTACGATAC GCTGACGACA GCGGACGCGA TGAGCCTGAC CAACGGCAAA
AGCACCTACG GGCGCGGGTC GTGGGCCAGT AGCCTGCGCT ACCTCAACGG CCTGTATTAC
GTGACCACCT TTGCGCAGAC CAGCGGCAGA ACCCACATCT ACACCACCAA AGACATCGAA
AAAGGACCGT GGAAGGCCGT TTCATTCAAA CCGTCGTACC ATGACCACAG CCTGTTTTTC
GACGACGACG GCCGAACGTA TCTAATCTAC GGCGCGGGCA AACTCCGGCT GGTTGAACTG
AACACCGATG CGTCGGGGGT GAAACCCGGC ACCACGGAGC AGGTCATCAT CGAGAACGCC
AGCACACCCT CAGGAACCGG CGGTGGCCTG CCTGCAGAAG GGTCGCAACT GTTTAAAGTA
AAGGGTAAAT ATTATCTGTT CAACATCAGC TGGCCCCGGG GCGGTATGCG TACGGTGATT
ATTCACCGGG CCGACAAGAT CACCGGTCCC TGGGAAGGCC GCGTGGCCTT GCAGGACCTG
GGTGTGGCAC AGGGTGGACT CATCGACACG CCCGACGGCC GCTGGTTTGC CTACCTGTTC
CGCGATTTCG GCGGGGTGGG CCGGATTCCA TATTTGGTAC CCGTCGAGTG GAAAGACGGC
TGGCCGGTGC TGGGCGTCAA TGGCAAAGTG CCCGAAACCC TCGATCTCCC CGCCAGCAAA
GGCTTAATTC CCGGCATTGT CAACTCCGAC GAATTCACCC GCAAAAAAGG CGACCCCGCC
CTGCCGCTAG TCTGGCAGTG GAATCACAAC CCCGACAACG CCCTGTGGTC GGTTTCGGAG
CGAAAAGGAT TTCTGCGCCT GAAAACCGGA CGAACCGACA CCTCGTTTGT GATGGCCCGC
AACACGCTTA CACAGCGTAC TATCGGCCCC GAATGTACCG GGTCTACCCT ACTCGATGCG
TCGAACATGA AAGACGGCGA TTTTGCCGGT CTGAGCCTGT TGCAAAAGAA TTACGGGCTG
GTGGGAGTGA AAGTCGAAAA TGGAAGCCGG TCGATTGTCA TGGTGAGTGC CAGTTCGGGC
AAGCCGGTAG AGATACAGCG CGTTCCGTTG AGCCAGAAAA TGGTCTACCT GAAAGCGGAG
TGTGATTTCA ACGACCGTAA AGACACCGCC CATTTCTTCT ACAGCCTCGA CGGAAAAGCG
TGGAGCCCCA TTGGGGAACC GCTGAAAATG CCGTACACCA TCCCGCACTT CATGGGCTAT
CGGTTCGGGC TGTTCAACTA CGCCACCTTG CAAACGGGCG GTTTTGCCGA CTTCGATTAT
TTCCGGATTA CCAACACAAT CTCCGGGCAA TAA
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| Protein sequence | MIISKGLHKK ALLWAGLMVV LLQTQNRVVA QTATNPVIFA DVPDMAMIRV GNTYYMSSTT
MHLSPGLPIM KSNDLINWKM VGYAYDTLTT ADAMSLTNGK STYGRGSWAS SLRYLNGLYY
VTTFAQTSGR THIYTTKDIE KGPWKAVSFK PSYHDHSLFF DDDGRTYLIY GAGKLRLVEL
NTDASGVKPG TTEQVIIENA STPSGTGGGL PAEGSQLFKV KGKYYLFNIS WPRGGMRTVI
IHRADKITGP WEGRVALQDL GVAQGGLIDT PDGRWFAYLF RDFGGVGRIP YLVPVEWKDG
WPVLGVNGKV PETLDLPASK GLIPGIVNSD EFTRKKGDPA LPLVWQWNHN PDNALWSVSE
RKGFLRLKTG RTDTSFVMAR NTLTQRTIGP ECTGSTLLDA SNMKDGDFAG LSLLQKNYGL
VGVKVENGSR SIVMVSASSG KPVEIQRVPL SQKMVYLKAE CDFNDRKDTA HFFYSLDGKA
WSPIGEPLKM PYTIPHFMGY RFGLFNYATL QTGGFADFDY FRITNTISGQ
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