| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1416 |
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| Symbol | |
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| ID | 8725150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1720981 |
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| End bp | 1722654 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycoside hydrolase family 39 |
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| Protein accession | YP_003386265 |
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| Protein GI | 284036335 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.336596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG TAGTCTTACT TTACCTTTTA TTGTTCTGTT GCCGCATCGC TTTCGCGCAG
CAGACGCCCG TTTCGATTCA GGTCGATGCC GCAAAACCCG TGGGCGACAT GAAGCCGTTC
TGGGCATTTT TCGGGTACGA CGAGCCTAAT TATACCACCC GGAAAGACGG CCAGAAACTG
CTGTCCGAAC TGCAGCAGTT AAGCCCCGTT CCGGTCTATG TTAGAGCGCA TAACCTGTTG
ACCTCTAAAG GCGAAAGCCC CGGCCCTGAC CTTAAATGGG GGTTTACGGA TGCGTATAAA
GAGGACGCCA ACGGCAAGCC CATCTATAAC TGGGTCACGG TCGACAGCAT CGTGGACACC
TACATCAAAC GGGGCATGAA GCCACTGATG GAAATTGGAT TCATGCCCAA AGACTTATCA
TCGAAACCCG AGCCATATGC CCATACCTGG AGTAAAAACG GCAACATCTG GACGGGCTGG
ACATATCCGC CCAAAGACTA TGACAAATGG CGGGAACTCG TGTACCAGTG GGGCAAACAT
TCCATTGACC GTTATGGCAA AAAAGAGGTG AGCACGTGGC TGTGGGAAGT CTGGAACGAG
CCGGACATTG GCTACTGGTC AGGTACGTTC GATGAATACT GCAAAACCTA CGACTATGCC
GCCGACGGTC TGAAACGGGC CTGTCCCGAA TGTACCATTG GCGGGCCGCA CACGACCAGT
CCCCGTAGCG ACAAAGCGTA CAGCTACCTG ACCCGGTTCA TCGAGCATTG CCTGCGGGGT
AAGAACTACG CGACTGGTAA AACCGGTACA CCCTTGCAAT ACATCGGCTT TCACGCCAAA
GGAAATCCCG AGATTGTCGA CGGGCACATT CGCATGAACA TGGGCGTGCA GTTAAAAGAC
GTGGAGCGGG CGTTTGAAGC CGTAAATTCA TTTCCGGAGC TGAAGAACAT TCCCATCATT
ATCGGCGAGT GCGACCCCGA AGGTTGTGCC GCCTGCTCGG CCACGCGTGA CCCCAAATAC
GGCTATCGCA ACGGCACCAT GTATTCCAGC TATACGGCGG CTTCGTTTGC CCGCATCTAC
GAACTGATGG ACCAGTACAA CGTGAACCTG CGCGGGGCCG TGAGCTGGTC GTTCGAGTTT
GAAGATCAGC CGTGGTTTGC CGGTTTCCGC GACCTGGCCA CACATGGCGT CGACAAGCCC
GTGCTGAACG TATTTCGGAT GTTTGGCAAG ATGAACGGCC AGCGGCTGTC GGTGCAAACC
AGCAAGGGGT TGGGTGCCGC CAACATCATT GCCAACGGTG TACGGGCCGA AAGCGACGTG
AACGCCATCG CCAGCAAAGG ACCTAACTCA GTTTGTGTGA TGGTCTGGAA TTACCACGAC
CATAACGTAC CTGGCCCTGC GGCTCCGGTA GAACTGACCG TGAGCGGACT CGGCAAAAAC
AAGGTACAGG TTCGCCATTA TCGGGTGGAT GATCAGCACA GCAATTCGTT CGAGGCATGG
AAGTCGATGG GTAGTCCACA GCAAGTTTCG ACCGATCAAT ATAAGTCGCT CGAAAAAGCG
GGACAGCTAC AGGAGCTGGC TCCTCCGACC TCGAAAGCTG TCGCCAATGG CAAAACAACA
CTAACCTTCG ACCTGCCCCG GCAGGGTGTG TCCTTTGTGC AACTGACCTG GTAA
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| Protein sequence | MKRVVLLYLL LFCCRIAFAQ QTPVSIQVDA AKPVGDMKPF WAFFGYDEPN YTTRKDGQKL
LSELQQLSPV PVYVRAHNLL TSKGESPGPD LKWGFTDAYK EDANGKPIYN WVTVDSIVDT
YIKRGMKPLM EIGFMPKDLS SKPEPYAHTW SKNGNIWTGW TYPPKDYDKW RELVYQWGKH
SIDRYGKKEV STWLWEVWNE PDIGYWSGTF DEYCKTYDYA ADGLKRACPE CTIGGPHTTS
PRSDKAYSYL TRFIEHCLRG KNYATGKTGT PLQYIGFHAK GNPEIVDGHI RMNMGVQLKD
VERAFEAVNS FPELKNIPII IGECDPEGCA ACSATRDPKY GYRNGTMYSS YTAASFARIY
ELMDQYNVNL RGAVSWSFEF EDQPWFAGFR DLATHGVDKP VLNVFRMFGK MNGQRLSVQT
SKGLGAANII ANGVRAESDV NAIASKGPNS VCVMVWNYHD HNVPGPAAPV ELTVSGLGKN
KVQVRHYRVD DQHSNSFEAW KSMGSPQQVS TDQYKSLEKA GQLQELAPPT SKAVANGKTT
LTFDLPRQGV SFVQLTW
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