Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1415 |
Symbol | |
ID | 8725149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1718874 |
End bp | 1720970 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | coagulation factor 5/8 type domain protein |
Protein accession | YP_003386264 |
Protein GI | 284036334 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGA ACCCTAAATC CATATTCGTT CAACTGGCGC TCTGTTTGTT GACAGGTCTT TCCGGACTTG CCCAGACATC TCCGCCACAG CCCGTTGGGC CACTTCCGAG TGCCAACCAG TTGCGCTGGC AGAAAATGGA GTATTACGCT TTCATCCATT TTTCGATCAA TACCTATACC GATATGGCCT GGGGCCTCGG CAACGAAGAC CCGAAACTGT TCAACCCCAC AAAACTGGAT TGTCGGCAAT GGGCGCGGAT TTGTAAAGAG GCCGGGATGA CAGGCATCAT TTTCACCGCC AAACACCATA GCGGTTTCTG CCTTTGGCCA TCCAAATACA CCGATTACTC CGTCAAAAAC GTGCCTTGGC GCAATGGGAA AGGCGATATC GTGCGCGAAC TGGCCGACGC CTGCAAGGAA TATGGCCTGA AGTTCGGGGT ATACCTCTCA CCCTGGGACC GGAACCATGC CGACTACGGT AAGCCCGAAT ACATCACCTA TTTCCGTAAC CAATTGACGG AGTTGCTGAC CAACTACGGC GACATTTTTG AAGTCTGGTA CGACGGGGCC AACGGCGGGT CGGGCTATTA TGGCGGAGCC AACGAAACGC GTAAAATCGA CGCCAAAACG TATTACGACT GGCCGAATAC CTACAAACTC GTGCGGAAGC TTCAGCCCAA CATCGTCATC TGGAACGACG GGGGCGACCG CGCCGACCTG CGCTGGGTGG GTACCGAAGC CGGCTACGTC GGCGAAACCA ACTGGAGCTT ACTGAATGCC ACCGGCGCCG TACCCGAAGA AATGTTGCGG CATGGCGTCG AGAACGGCAA TGCGTGGGTG CCTGGCGAAG TAAACACGTC CATCCGGCCC GAGTGGTTCT ACCACGAACG CGAAGACAAA AAGGTGAAAA CGTTGCCTCA ACTGATGGAT ACCTATTACA ATTCCATCGG TCGGAACGGG ACACTGCTGC TCAATTTTCC GATCATGCCC AACGGCCTGA TTAATGACTT AGATGAGAAA GCCGTGCAGG CTTTCGCCAA AGCCAGGAAA GAAGCCTTTG CCGTAAATCT AGCTAAAAAT GCGAAAGCAA CGGCCTCTGA GGTACGAGGG AAAAGCGCGA CGTACAATGC TGATAAAGCC ATTGACGCCG ACTTGGAAAG CTACTGGGCC ACAGATGATG CTGTTCGGAA AGCCTCACTG ACGTTACAGT TCGCGAAGCC TACGACGTTC AACCGGTTTC TGGTGCAGGA ACCCATTCGC CTGGGGCAAC GGGTTAAATC GTTTACCGTC GAGGCTCTGG TCGATGGCAA TTGGAAGGCG ATTGACAAAC AAACGACCAT TGGCTACAAA CGCATTCTGC GTTTCCCCAC CGTCGAAGCC ACCCAACTGC GCCTGACGAT TCTGGACGCC AAAGGCAGTC CGTTGATCTC GAATCTGGCT GTTTACAATG CCCCTCTGAT TCTATCGCCC CCGGTCATCA CCCGCAATCA GGCGGGCGAC ATTCAGATCA AGGCGGGCGA TACCGAATCG GACGTGTATT ACACCCTCGA CGGTAGTATG CCGACAGCGA AATCCAGCAA ATACACAGCT CCGGTAAAAA CCAACTCCGG CAAAGTGGAC ATCAAAGCCA TCGCTTACAA CCCCTTTACA AAGCAAAGCA GCGTCGTCAA TGAAGAGAAA TTTGAGATTG CCCGCAGCAA CTGGAAAATC CTGAGTACCG GCGCCAAATC GGCCTATCAG GCACTTGACG GCAACCCCGG CACGTCCTGG CAGCAACCCA AAAGTCAACC CTTGCCTGCT GATCTGGTCA TTGATCTGGG GAAGGAAGAA AACCTGACCG GTTTCCGGTA CCTGCCTGCC CAAAACTGGT GGGAAGAGGC CAGCATCATC ACCCATTACG AGTTTGACGT ATCAGCTGAC AATAAAAACT GGAAACGAGT TAGCGAAGGC GAATTCTCGA ATATCAAAAA TAGCCCAGTC TGGCAAACCA AATCGTTTGC GCCGATCAAA GCCCGGTATG TGAAATTGAC GGCGTTAAAG AATACGCAGG AGGGGTCGGC CTCGGGCTAC GCGGAAGTGG ATGTGATGAC ACAGTGA
|
Protein sequence | MKLNPKSIFV QLALCLLTGL SGLAQTSPPQ PVGPLPSANQ LRWQKMEYYA FIHFSINTYT DMAWGLGNED PKLFNPTKLD CRQWARICKE AGMTGIIFTA KHHSGFCLWP SKYTDYSVKN VPWRNGKGDI VRELADACKE YGLKFGVYLS PWDRNHADYG KPEYITYFRN QLTELLTNYG DIFEVWYDGA NGGSGYYGGA NETRKIDAKT YYDWPNTYKL VRKLQPNIVI WNDGGDRADL RWVGTEAGYV GETNWSLLNA TGAVPEEMLR HGVENGNAWV PGEVNTSIRP EWFYHEREDK KVKTLPQLMD TYYNSIGRNG TLLLNFPIMP NGLINDLDEK AVQAFAKARK EAFAVNLAKN AKATASEVRG KSATYNADKA IDADLESYWA TDDAVRKASL TLQFAKPTTF NRFLVQEPIR LGQRVKSFTV EALVDGNWKA IDKQTTIGYK RILRFPTVEA TQLRLTILDA KGSPLISNLA VYNAPLILSP PVITRNQAGD IQIKAGDTES DVYYTLDGSM PTAKSSKYTA PVKTNSGKVD IKAIAYNPFT KQSSVVNEEK FEIARSNWKI LSTGAKSAYQ ALDGNPGTSW QQPKSQPLPA DLVIDLGKEE NLTGFRYLPA QNWWEEASII THYEFDVSAD NKNWKRVSEG EFSNIKNSPV WQTKSFAPIK ARYVKLTALK NTQEGSASGY AEVDVMTQ
|
| |