Gene Slin_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1399 
Symbol 
ID8725133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1700475 
End bp1701053 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content53% 
IMG OID 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003386248 
Protein GI284036318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.409432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA AAACATATTT TGGCTGGGCG GTGGCCACTG TCCTTTTTGT TGGCACGCAT 
GCTTCTATTA TGGCACAGAG CCAGAATGCG GCAGCACAAA CAAATACGAC CACCACCACG
ATGAAGCCGG GGAGCTCAAC CGGGAAAGAT CTGGCCATCA GTGCCGCTAA GTCAGCTAAC
CACACCATTT TATTCCGTGC CCTGCGCGTA TCAGGGCTTA CGGAGCAAGC CAGTGGAAAA
GGCCCATACA CGGTGTTCGC ACCGACAAAC GAAGCCTTTG AAAAGCTACC GGCTGGTACG
ATGGAGGAGT TCTGGAAGCC AGCGGGCAAG CCTAAACTGG TGAAGTTGCT CGCTTACCAT
GTGGTAAAGG GGAAATTCAC CGCCGATCAA TTACAGGATG GACAGAAGCT CAAGACCGTA
ACGGGGGGTA CCTTAATCGT AGGCAAACAG GGCGATAACA TAACCATCAC GGATGGGGCC
GGCAATACGG CCACGATCAA CCAGGCGGAT GTTGAAGCGA CCAATGGCAT TGTTCATTCA
ATTGATTCAA TACTGATGCC GACAGCCGCA GGGCAGTAA
 
Protein sequence
MNRKTYFGWA VATVLFVGTH ASIMAQSQNA AAQTNTTTTT MKPGSSTGKD LAISAAKSAN 
HTILFRALRV SGLTEQASGK GPYTVFAPTN EAFEKLPAGT MEEFWKPAGK PKLVKLLAYH
VVKGKFTADQ LQDGQKLKTV TGGTLIVGKQ GDNITITDGA GNTATINQAD VEATNGIVHS
IDSILMPTAA GQ