Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1399 |
Symbol | |
ID | 8725133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1700475 |
End bp | 1701053 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003386248 |
Protein GI | 284036318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.409432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGA AAACATATTT TGGCTGGGCG GTGGCCACTG TCCTTTTTGT TGGCACGCAT GCTTCTATTA TGGCACAGAG CCAGAATGCG GCAGCACAAA CAAATACGAC CACCACCACG ATGAAGCCGG GGAGCTCAAC CGGGAAAGAT CTGGCCATCA GTGCCGCTAA GTCAGCTAAC CACACCATTT TATTCCGTGC CCTGCGCGTA TCAGGGCTTA CGGAGCAAGC CAGTGGAAAA GGCCCATACA CGGTGTTCGC ACCGACAAAC GAAGCCTTTG AAAAGCTACC GGCTGGTACG ATGGAGGAGT TCTGGAAGCC AGCGGGCAAG CCTAAACTGG TGAAGTTGCT CGCTTACCAT GTGGTAAAGG GGAAATTCAC CGCCGATCAA TTACAGGATG GACAGAAGCT CAAGACCGTA ACGGGGGGTA CCTTAATCGT AGGCAAACAG GGCGATAACA TAACCATCAC GGATGGGGCC GGCAATACGG CCACGATCAA CCAGGCGGAT GTTGAAGCGA CCAATGGCAT TGTTCATTCA ATTGATTCAA TACTGATGCC GACAGCCGCA GGGCAGTAA
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Protein sequence | MNRKTYFGWA VATVLFVGTH ASIMAQSQNA AAQTNTTTTT MKPGSSTGKD LAISAAKSAN HTILFRALRV SGLTEQASGK GPYTVFAPTN EAFEKLPAGT MEEFWKPAGK PKLVKLLAYH VVKGKFTADQ LQDGQKLKTV TGGTLIVGKQ GDNITITDGA GNTATINQAD VEATNGIVHS IDSILMPTAA GQ
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