Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1379 |
Symbol | |
ID | 8725112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1677703 |
End bp | 1679040 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ethanolamine transporter |
Protein accession | YP_003386228 |
Protein GI | 284036298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCG AAACACCGAC TCTCAAAAAA GCATTAACAC CCGTTCACTT ATGGGCTATT GGCGTAGGGC TGGTTATCTC GGGCGAGTAT TTTGGCTGGA ACTACGGCTG GGGCGTGGCT GGAACGGTAG GGCTTCTCAT CGCTACCCTG ATTATCACCC TGCTTTATTT CACCTTCATT TTTAGTTTTA CCGAACTGAC AACGGCCATT CCCAATGCCG GTGGCCCCTT CGCCTATGCC TTGCAGGCTT TTGGGCCGTT AGGGGCGTTA CTGGCCGGGT ACGCCACGCT CATCGAGTTT CTGTTCGCCA CGCCCGCCAT TGCGCTCGCC CTGGGCAGTT ATGTCCATTT CCTGTATCCG GTTGTGCCAG TTGTCTGGTG TTCGATTGGT TCATTTGCGG TGTTTACCGT CATCAATTTG CTGGGAATCA AAGAGGCCGC CTGGTTCTCG CTGATTATGA CTATTATCGC CATTGGCGAG TTGCTGTTGT TCATTGGTGT TGTGTATCCA TATACCCGCA TCGACACGTT TCTGCATAAC CCGATGCCGT TTGGCTGGCC GGGCGTATTC GCGGCTCTGC CGTTTGCGAT CTGGCTGTTC GTGTGTCTGG AAGGCATTGC GATGGTGGCC GAAGAAGTGA AAGACGGTAA AAACACCATC GCTAAAGGGT ATATATCGGC TGTGCTGACG CTGACATTTC TCGCCCTGAC GGTCATGATC AGTGTAGGGG GTATCACCAA CTGGGAAAAT CTCGACAAAC TCGACTACCC CATGCCCGAA GCTATTGCCA TTGTGCTCGG CCGGCAAAAT CCGCTCACGC AGTTTTTCGC CAGTGTTGGC CTTTTTGGTC TGATAGCCTC GTTTCATGGC ATCATCATCA GCTATTCCCG ACAGATTTTT GCCCTGGCTC GCAGTGGGTA TCTGCCGCAT GGGCTGGCGC AGGTCAGTAA AACCCGAAAA GTGCCTGTTT GGGCGTTGAT TGCCGGGGCA GTATTCGGAA TTATAGCCCT TATTTCGCTG GACACCAGCA AGCTGGTTAT CCTGTCGACC ATTGGGGCGG TGGTGGTTTA CATCATCAGC ATGTTGTCGC TGTTCCGGCT CCGGCAAACT CAACCGGCGC TACCCCGGTC GTTCAAAGCT CCGTTGTACC CCTTCTTCCC GGCCATTGCG CTGTTGCTGG CGGTTATAAC TTTGGGGGCA ATGATTTATT TTTATAGCTG GCTGAGTTTG TTGTTTTTTG GTGGGCTGGT CGCGATAATG GGCGTCTTTA TCGCATCCGG CCGTTATCGA AAAATCAGGC AGGAGTGGGG AAAAGTGGTT GAAAAAGTAG TCGACTAA
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Protein sequence | MPSETPTLKK ALTPVHLWAI GVGLVISGEY FGWNYGWGVA GTVGLLIATL IITLLYFTFI FSFTELTTAI PNAGGPFAYA LQAFGPLGAL LAGYATLIEF LFATPAIALA LGSYVHFLYP VVPVVWCSIG SFAVFTVINL LGIKEAAWFS LIMTIIAIGE LLLFIGVVYP YTRIDTFLHN PMPFGWPGVF AALPFAIWLF VCLEGIAMVA EEVKDGKNTI AKGYISAVLT LTFLALTVMI SVGGITNWEN LDKLDYPMPE AIAIVLGRQN PLTQFFASVG LFGLIASFHG IIISYSRQIF ALARSGYLPH GLAQVSKTRK VPVWALIAGA VFGIIALISL DTSKLVILST IGAVVVYIIS MLSLFRLRQT QPALPRSFKA PLYPFFPAIA LLLAVITLGA MIYFYSWLSL LFFGGLVAIM GVFIASGRYR KIRQEWGKVV EKVVD
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