Gene Slin_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1379 
Symbol 
ID8725112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1677703 
End bp1679040 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content53% 
IMG OID 
Productethanolamine transporter 
Protein accessionYP_003386228 
Protein GI284036298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG AAACACCGAC TCTCAAAAAA GCATTAACAC CCGTTCACTT ATGGGCTATT 
GGCGTAGGGC TGGTTATCTC GGGCGAGTAT TTTGGCTGGA ACTACGGCTG GGGCGTGGCT
GGAACGGTAG GGCTTCTCAT CGCTACCCTG ATTATCACCC TGCTTTATTT CACCTTCATT
TTTAGTTTTA CCGAACTGAC AACGGCCATT CCCAATGCCG GTGGCCCCTT CGCCTATGCC
TTGCAGGCTT TTGGGCCGTT AGGGGCGTTA CTGGCCGGGT ACGCCACGCT CATCGAGTTT
CTGTTCGCCA CGCCCGCCAT TGCGCTCGCC CTGGGCAGTT ATGTCCATTT CCTGTATCCG
GTTGTGCCAG TTGTCTGGTG TTCGATTGGT TCATTTGCGG TGTTTACCGT CATCAATTTG
CTGGGAATCA AAGAGGCCGC CTGGTTCTCG CTGATTATGA CTATTATCGC CATTGGCGAG
TTGCTGTTGT TCATTGGTGT TGTGTATCCA TATACCCGCA TCGACACGTT TCTGCATAAC
CCGATGCCGT TTGGCTGGCC GGGCGTATTC GCGGCTCTGC CGTTTGCGAT CTGGCTGTTC
GTGTGTCTGG AAGGCATTGC GATGGTGGCC GAAGAAGTGA AAGACGGTAA AAACACCATC
GCTAAAGGGT ATATATCGGC TGTGCTGACG CTGACATTTC TCGCCCTGAC GGTCATGATC
AGTGTAGGGG GTATCACCAA CTGGGAAAAT CTCGACAAAC TCGACTACCC CATGCCCGAA
GCTATTGCCA TTGTGCTCGG CCGGCAAAAT CCGCTCACGC AGTTTTTCGC CAGTGTTGGC
CTTTTTGGTC TGATAGCCTC GTTTCATGGC ATCATCATCA GCTATTCCCG ACAGATTTTT
GCCCTGGCTC GCAGTGGGTA TCTGCCGCAT GGGCTGGCGC AGGTCAGTAA AACCCGAAAA
GTGCCTGTTT GGGCGTTGAT TGCCGGGGCA GTATTCGGAA TTATAGCCCT TATTTCGCTG
GACACCAGCA AGCTGGTTAT CCTGTCGACC ATTGGGGCGG TGGTGGTTTA CATCATCAGC
ATGTTGTCGC TGTTCCGGCT CCGGCAAACT CAACCGGCGC TACCCCGGTC GTTCAAAGCT
CCGTTGTACC CCTTCTTCCC GGCCATTGCG CTGTTGCTGG CGGTTATAAC TTTGGGGGCA
ATGATTTATT TTTATAGCTG GCTGAGTTTG TTGTTTTTTG GTGGGCTGGT CGCGATAATG
GGCGTCTTTA TCGCATCCGG CCGTTATCGA AAAATCAGGC AGGAGTGGGG AAAAGTGGTT
GAAAAAGTAG TCGACTAA
 
Protein sequence
MPSETPTLKK ALTPVHLWAI GVGLVISGEY FGWNYGWGVA GTVGLLIATL IITLLYFTFI 
FSFTELTTAI PNAGGPFAYA LQAFGPLGAL LAGYATLIEF LFATPAIALA LGSYVHFLYP
VVPVVWCSIG SFAVFTVINL LGIKEAAWFS LIMTIIAIGE LLLFIGVVYP YTRIDTFLHN
PMPFGWPGVF AALPFAIWLF VCLEGIAMVA EEVKDGKNTI AKGYISAVLT LTFLALTVMI
SVGGITNWEN LDKLDYPMPE AIAIVLGRQN PLTQFFASVG LFGLIASFHG IIISYSRQIF
ALARSGYLPH GLAQVSKTRK VPVWALIAGA VFGIIALISL DTSKLVILST IGAVVVYIIS
MLSLFRLRQT QPALPRSFKA PLYPFFPAIA LLLAVITLGA MIYFYSWLSL LFFGGLVAIM
GVFIASGRYR KIRQEWGKVV EKVVD