| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1378 |
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| Symbol | |
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| ID | 8725111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1675068 |
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| End bp | 1677584 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003386227 |
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| Protein GI | 284036297 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCA GAAGGGACTT TCTCAAAAAA GCTGCGTTGT TATCCGCAGG CTTGTCCGGT
AGTTTACCCG AGTCGATTCA GAAAGCGTTT GCCATCAACC CGCCAGCCGG AACAACTTAC
CTGGATGCCG AACATGTGGT TATTCTGATG CAGGAAAACC GCTCGTTCGA TCACACCTAC
GGCGCACTTC AGGGCGTCCG GGGCTTCAAC GACCCACGGG CTATCCGGTT GCCCAACAGC
AACAAAGTCT GGCTACAGAC CAACAAAGCG GGCGAGACAT ACGCCCCCTT CCGGCTCAAC
ATGCGCGATA CCAAAGCGAC CTGGATGAGT TCGCTGCCGC ACTCCTGGGA AAACCAGGTG
GACGCCCTGA ACGGAGGAAA GAACGACAAG TGGCTCGACG CCAAAAAGTC GGGCAACAAA
GCGTATGCTG ATATGCCCCT CACGCTGGGT TACTACAACC GGGACGACCT GCCGTTTTAT
TACGCTCTGG CCGATGCCTT CACCGTTTGC GATCAGAATT TCTGCTCATC GTTGACGGGT
ACGACGCCCA ACCGCCTGTA CTTCTGGACG GGTACTATCC GTGATCCCCG CGACCCGCAG
GCCATTGCCA ACGTTCGGAA CGAAAACGTG GATTATGATG CGGAGGTGAG CTGGACAACC
TTTCCCGAGC GGCTGGAAGC GCTGGGTATT CCCTGGAAAA TTTACCAGAA CGAAATAAGC
TTGCCAACGG GGCTGGAAGG GGAGGCCGAT GGCTGGCTGA GCAACTTCAC GGACAACCCC
ATCGAGTGGT TTTCGCAGCA CCGGGTACGG TTCCATCCGG CCTATTACGC ACACATTCAA
CAAGAGGAAA AACGCCTTCC CGAACGCATC AAGGCACTGG AAGCAAAACT GAAAAGCCTG
ACCCAAACTG ATAAAGATTA CGCCAAAATA AAACGGGAAC TGGATAACCA GCAGAAATGG
CAGAAAATAG TCGAGGCCGA TCTGGTGACC TATAGCCCGG AGAAATTCGA GCAGCTATCA
CCCGCTGAGA AAAATCTTTG CCGACGGGCG TTCACCACCA ATGCCAATGA CCCGCACTAC
CGCGCATTGA CCCCGTTAAC GTATCAGGAT GGCAACGCAA CCCGTACAGT CAACGTCCCG
AAAGGCGATG TGCTTCACCA GTTCCGGGAA GATGTTAAAA ACAAAGCCCT GCCTACCGTT
TCGTGGGTGG TGGCGCCCGA AAACTTTTCC GATCACCCGT CTTCGGCCTG GTATGGTGCC
TGGTACATAT CGGAAATGCT GGATATTCTG ACCCAGAATC CGGAGGTTTG GAAAAAGACG
ATTTTCGTGC TGGCTTACGA CGAGAACGAT GGCTATTTCG ACCACGTCCC CCCGTTTGTG
CCCGCTCACC CCGACCAGCC CGAGACGGGA AAAACCAGCA AAGGCATTGA TACCCGCGCC
GAATTTGTGA CGCAGGAACA GGAAAGTACC CGTAAAAATC GGGGACGAAC CGGTCCGATT
GGGCTGGGTT TTCGCGTACC ACTGGTGATT GTATCACCCT GGAGCCGGGG CGGATATGTG
TGTTCGGAAG TGTTCGACCA CACCTCTACG TTACAGTTTC TGGAGAACTT CCTGAGCCAC
AAGAGGGGCA AAAAGATTGA AGAGTCGAAT ATAAGCACCT GGCGTCGTAC GGTATGCGGT
GACCTCTCGT CGGCTTTCCG GCCCTACAAC GGCGAGACGA TCAGAATGCC GAAATCGGTG
GATAAAGAAG CGTTTATTGA AGCCATTCAT AAAGCCCAGT TTAAAGATGT ACCCACCAAT
TACAAACGCC TGACCGACGA GGAGATTCAG CAATGCAACA CCCGCCAGGC ATCGCCCTAT
CTGCCAACGC AGGAAGAGGG TGTCCGTAAA TCGTGCGCCC TGCCCTATGA GTTGTACGTA
GATGGGTTTG TCGCGAACAA ACAGCTTTCG CTGCGGCTAT CAGCAAAGCG GGAGGCTTTC
GGAAAGCAAT CGCTTGGGGC ACCGTTTCAG GTTTACCAGC AAAAAACGGA CGATGTTTCG
GTGCGGTCGT ATACCGTTAC GGCAGGGGAC GAATTTCGGG ATACGCTGCC TCTGTCCGGC
GATTTTCAGG TGTCTGTCTA CGGCCCAAAT GGTTTCTTCC GAGACTTTAA AGGCAGTACG
GCCAACCCGG CTATTGAAAT CGTCTGCGAC TACGAGAAAG ACGCGAAAAA GAAGTACACC
GGAAATGTAT CGGTAAAACT TAGCAACACC GATCCATCCC GGACGTATAC CGTTCAGATT
CTGGACAACG GATATCAGGG AAAACCACAG CAGCTTGCTC TGGCAAAAGC CGGAACTGCC
GGAGCGCAGA AGTCGCTGGT GCTTTCCCTG AAAGACAGTC ATAACTGGTA TGATTTCAGT
ATAAAAGTAA CCGGGTTCGA CGCCTTTGAG CAACGTTATG CCGGGCGGGT GGAGACCGGA
AAAGCTGGTT TTAGCGACCC ATTGATGGGA AAGGTGCCCG TTCTGGCCAG TCGGTAA
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| Protein sequence | MDSRRDFLKK AALLSAGLSG SLPESIQKAF AINPPAGTTY LDAEHVVILM QENRSFDHTY
GALQGVRGFN DPRAIRLPNS NKVWLQTNKA GETYAPFRLN MRDTKATWMS SLPHSWENQV
DALNGGKNDK WLDAKKSGNK AYADMPLTLG YYNRDDLPFY YALADAFTVC DQNFCSSLTG
TTPNRLYFWT GTIRDPRDPQ AIANVRNENV DYDAEVSWTT FPERLEALGI PWKIYQNEIS
LPTGLEGEAD GWLSNFTDNP IEWFSQHRVR FHPAYYAHIQ QEEKRLPERI KALEAKLKSL
TQTDKDYAKI KRELDNQQKW QKIVEADLVT YSPEKFEQLS PAEKNLCRRA FTTNANDPHY
RALTPLTYQD GNATRTVNVP KGDVLHQFRE DVKNKALPTV SWVVAPENFS DHPSSAWYGA
WYISEMLDIL TQNPEVWKKT IFVLAYDEND GYFDHVPPFV PAHPDQPETG KTSKGIDTRA
EFVTQEQEST RKNRGRTGPI GLGFRVPLVI VSPWSRGGYV CSEVFDHTST LQFLENFLSH
KRGKKIEESN ISTWRRTVCG DLSSAFRPYN GETIRMPKSV DKEAFIEAIH KAQFKDVPTN
YKRLTDEEIQ QCNTRQASPY LPTQEEGVRK SCALPYELYV DGFVANKQLS LRLSAKREAF
GKQSLGAPFQ VYQQKTDDVS VRSYTVTAGD EFRDTLPLSG DFQVSVYGPN GFFRDFKGST
ANPAIEIVCD YEKDAKKKYT GNVSVKLSNT DPSRTYTVQI LDNGYQGKPQ QLALAKAGTA
GAQKSLVLSL KDSHNWYDFS IKVTGFDAFE QRYAGRVETG KAGFSDPLMG KVPVLASR
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