Gene Slin_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1377 
Symbol 
ID8725110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1674440 
End bp1674922 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003386226 
Protein GI284036296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGC GCGTTACACG TAATAACCAG ATATGTGTCT TTTTCCTTGT CATCAACCTT 
ATGTGGATTC TTTTTGCGTT ACTGGCTGCC GTAGCCGCAG CTGTGGTTGT CACCTTATCC
AAAGCCGGCA TTAAAGACGT CGATTCGAGT CTGGCGTTTG CCATTCAATC CGTGCTGATT
CTGATTGTTT CCTGGACCGT TGTGATCAGC CAGGGCAACC TGCCCGATGT GACGCGTATT
GAGCGAAAAG TCTGGATCTA TCTGATTTCG GCGGGGGTAC TCACCTGTAT ATCCTCGCTC
CTCTCCTTTC GGGCATTGAA GCTGGGCAAT GCAGCTCAGG TATCGCCAAT TACGAATGTG
TCGCTGCTGA TTGCTGTCAT TCTGGCGGTT GTCTTTCTAA AAGAAAAAGT CACCTGGCAG
ATCGTCGCCG GGGCCATACT CATGGCTGCC GGAGCCGTCA TGATTGCGAT CAGCCGCGAT
TGA
 
Protein sequence
MVLRVTRNNQ ICVFFLVINL MWILFALLAA VAAAVVVTLS KAGIKDVDSS LAFAIQSVLI 
LIVSWTVVIS QGNLPDVTRI ERKVWIYLIS AGVLTCISSL LSFRALKLGN AAQVSPITNV
SLLIAVILAV VFLKEKVTWQ IVAGAILMAA GAVMIAISRD