| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1376 |
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| Symbol | |
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| ID | 8725109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1671869 |
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| End bp | 1674358 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | HRDC domain protein |
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| Protein accession | YP_003386225 |
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| Protein GI | 284036295 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTT CCGTAAATGA AAAGCTCGAC CTGGCTCACA ACTTTGTCCT GCATACCAAT
CAAAATATTT TCCTGACCGG GAAAGCCGGA ACCGGTAAAA CAACCTTTCT GCAACGAATC
AAGCAACTCA GTGCCAAGCG ATTGGCGGTA GTAGCGCCAA CGGGCGTGGC GGCCATTAAT
GCGGGGGGCG TGACTATTCA TTCGCTGTTT CAGCTTCCCT TTGGCCCCAT AACGCCGGGA
ACTACCCAGC GCGAAGGCAA GAAGTTTAAC AAAGAGAAAA TCAACTTACT CCGAACCCTC
GACCTGCTGG TTATCGACGA AATCAGTATG GTTCGGAGCG ATGTTCTCGA CGGCATCGAC
GAAGTTCTCC GGCGCTACCG GTCCAGTTCG GCTCCCTTTG GCGGGGTTCA GTTACTGCTC
ATCGGCGATA TGCAGCAGTT GCCTCCGGTC ATTAAAGAGG AAGACTGGGC CTTGCTGAGA
CCTTATTACG ATACCGGCTA TTTTTTCGGG AGCAAAGCCC TGCGCCAGAC ATCCTACGTG
CCCATTGAGC TGACGCACAT CTACCGGCAA TCCGACGAGC GATTCATCAG CCTGCTCAAC
AGTATCCGGG AGAAGACCGT TACCCGCGCT CAGCTCGACA ACCTGAATCA ACGCTATATT
CCCGACTTTT CGCCCGCCGA GGATGAGGGC TATATTACGT TATCGACCCA TAATACAGCT
GCCCAGCAGA TAAACAGCCA GAAATTACAG GCGCTGAAGG GCAAACCGCG CACGTTCACG
GCAACCATTG AGGGGGATTT TCCGGCGCAT ACTTACCCCA CCGAAGCCAG CCTTGAGTTA
AAAGTGGGCG CTCAGGTGAT GTTCATCAAG AACGATATTT CCCGCGATAA GCTATACTAC
AACGGCAAGA TCGGGCGGAT CACCGACATG GACGAGTCGG CTATTTACGT CAAAAGCCAC
CAGGATGGAC AGGAAATTGT CGTTTACCCC GTCGATTGGA CGAACATCAA ATATACCCTA
GACCCAACCA CCAAAGAGAT AAAGAGTGAG CCGATTGGCA CCTTCCGGCA AATGCCGCTC
AAACTGGCCT GGGCCATCAC CGTTCACAAA AGCCAGGGGC TGACGTTTGA GAAAGCGATT
CTGGATATTT CGTCGGCGTT CGCTCACGGT CAGGTGTATG TAGCGTTAAG CCGTTGTAAA
ACACTGGATG GACTGGTTTT GCGGAAACCC ATTCCGGCGC ACAGCATCAA AACGGAACTG
GAACTAGAGG ACTTTCATCA GCAAGTTCAA TTACAAACCC CCAACGAGCA GCACCTCCAC
CAAGCGAAAC TAACCAACCA GCAACACCTC CTGCGCGAAC TTTTCTCGTT CGAGCGGGCC
AATTCGTTGC TCTACCGTTG TCGGCGGGTG GTGAACGAAC ACGCCAGCAG TCTGGACGCC
GAATGTCCGT CTATTCTTGC TCAATTGACC GATCTGCTGC GCGAGAAAGC CAGCGATGTA
TCGGGGCGAT TTCAGCAACA GTTACCCAGT TATTTCGCCA ACGAAAAGCT ACCGGAACAC
AACGAGGCTT TGCAGGAACG CGTCCGAAAA GCGGGGACCT ATTTTCAGTC GCTGCTCGGC
TCCGACCTGT TGCCGCTGCT ACAGCGCTGC CCAACCGACT GCGACAACAA GAAGGTTCGC
GATTTGCTGC TGGAAGCCCT GGATGAGTTA GAGAAAGAGC TGTTTTCTAA ACTCCGAAGT
TTTGAGAGTT GCCGGGAAGG TTTCAACGCG TTAAGCTATC TACAGGCGCG GAACCGTGCC
GAACTCGACT TCCAGCCCGA GCGCAAAAAG CTGGAACCCC AGCCCACCGA GACGAGCGCT
TCGGAAGGGT CTTCGCGTGG CGGATTGTAC GGTGCCCTCA TGAAGTGGCG AAACGATATG
GCCGGTGAAC ACAACACCTC CGGCTTTATG GTGCTGCCCC AAAAAACCAT CGTTGAACTG
GCACGGGTTC GTCCAACTTC CGAAGCCGAA TTATTGGCCA TCAAGGGGTT TGGCAAAACG
AAAGTTCGCC AGATTGGTGC CGATATTCTC CGCATCGTTC AGGAGAACCC CGGCGGCCGG
GCGGCCAGTG TAGCGACGCC TACAGGCAAA GTGCCCAAAG AAAAGCCCGT CAAAGAGCCG
AAAGCGCCTA AGGAACCCAA AGAACTGTCA CCCGCCATTA CGCTGGCTTT CTTTCAATCG
GGCAAAAGCA TCGACCAGAT TGCCACCGAG CGCAGTCTGG CCGTTTCAAC CGTCGAGAGC
CACCTGGTTC GCTACGTGGG CTCGGGCGAT CTGGCCGTTG AATCGGTGTT ACCCCCTACC
AAAATTGCCA GTATCCGGTC CTATCTGGAA ACTTACCCTT CCGAAACCCT GACCGAAGTA
CGGCAGGGCC TGGGCAGTGA TATCTCGTTC AGCGACATCC GGTTCGTGCA GTACGCCTTG
CGGGCCGAGG CCGCAGCGAG TGGGGAGTAA
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| Protein sequence | MTVSVNEKLD LAHNFVLHTN QNIFLTGKAG TGKTTFLQRI KQLSAKRLAV VAPTGVAAIN
AGGVTIHSLF QLPFGPITPG TTQREGKKFN KEKINLLRTL DLLVIDEISM VRSDVLDGID
EVLRRYRSSS APFGGVQLLL IGDMQQLPPV IKEEDWALLR PYYDTGYFFG SKALRQTSYV
PIELTHIYRQ SDERFISLLN SIREKTVTRA QLDNLNQRYI PDFSPAEDEG YITLSTHNTA
AQQINSQKLQ ALKGKPRTFT ATIEGDFPAH TYPTEASLEL KVGAQVMFIK NDISRDKLYY
NGKIGRITDM DESAIYVKSH QDGQEIVVYP VDWTNIKYTL DPTTKEIKSE PIGTFRQMPL
KLAWAITVHK SQGLTFEKAI LDISSAFAHG QVYVALSRCK TLDGLVLRKP IPAHSIKTEL
ELEDFHQQVQ LQTPNEQHLH QAKLTNQQHL LRELFSFERA NSLLYRCRRV VNEHASSLDA
ECPSILAQLT DLLREKASDV SGRFQQQLPS YFANEKLPEH NEALQERVRK AGTYFQSLLG
SDLLPLLQRC PTDCDNKKVR DLLLEALDEL EKELFSKLRS FESCREGFNA LSYLQARNRA
ELDFQPERKK LEPQPTETSA SEGSSRGGLY GALMKWRNDM AGEHNTSGFM VLPQKTIVEL
ARVRPTSEAE LLAIKGFGKT KVRQIGADIL RIVQENPGGR AASVATPTGK VPKEKPVKEP
KAPKEPKELS PAITLAFFQS GKSIDQIATE RSLAVSTVES HLVRYVGSGD LAVESVLPPT
KIASIRSYLE TYPSETLTEV RQGLGSDISF SDIRFVQYAL RAEAAASGE
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